Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 107 2e-18
>seq1893
Length=9943
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || || ||| | || || || | |||||| | || | || ||| |
Sbjct 576 ATGCAGATTTTCGTGAAGACACTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCC 635
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| ||||||| ||||| || || || ||||| || ||
Sbjct 636 GACACCATCGACAATGTCAAGTCAAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 695
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| |||| |||| || ||||| ||||||||||||| | | | |||||| |||
Sbjct 696 CAGCGACTGATTTTCGCTGGCAAGCAACTCGAAGATGGCCGTACTCTGTCCGACTACAAC 755
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| || || |||||||| | ||||| |||||| | ||| | || ||
Sbjct 756 ATCCAGAAGGAATCTACGCTGCATCTCGTCCTGCGTCTTCGGGGTGG 802
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852
||||| || | || ||| |||| | || || |||||| || || | ||||| |
Sbjct 903 ACTGGCAAGACCATTACCCTCGAGGTTGAGTCCTCCGACACTATTGACAACGTCAAGTCA 962
Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912
|||||| || || |||||||| ||||| || || ||| | || |||| || |||||
Sbjct 963 AAGATTCAGGATAAGGAAGGGATCCCTCCGGACCAGCAACGTCTGATTTTCGCTGGCAAG 1022
Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972
||||| ||||||| | | | || |||||| ||||||||||| ||||| || | |||
Sbjct 1023 CAACTTGAAGATGGGCGCACCCTCTCCGACTACAACATTCAAAAGGAATCAACACTTCAT 1082
Query 26973 CTGGTCCTGAGACTTAGAGGAGG 26995
|||| || | || |||| ||
Sbjct 1083 TTGGTGTTGCGTCTCCGAGGTGG 1105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478650230008480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |