Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1893 107 2e-18 >seq1893 Length=9943 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || ||| | || || || | |||||| | || | || ||| | Sbjct 576 ATGCAGATTTTCGTGAAGACACTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCC 635 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| ||||||| ||||| || || || ||||| || || Sbjct 636 GACACCATCGACAATGTCAAGTCAAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 695 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || |||| |||| || ||||| ||||||||||||| | | | |||||| ||| Sbjct 696 CAGCGACTGATTTTCGCTGGCAAGCAACTCGAAGATGGCCGTACTCTGTCCGACTACAAC 755 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || |||||||| | ||||| |||||| | ||| | || || Sbjct 756 ATCCAGAAGGAATCTACGCTGCATCTCGTCCTGCGTCTTCGGGGTGG 802 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 ||||| || | || ||| |||| | || || |||||| || || | ||||| | Sbjct 903 ACTGGCAAGACCATTACCCTCGAGGTTGAGTCCTCCGACACTATTGACAACGTCAAGTCA 962 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 |||||| || || |||||||| ||||| || || ||| | || |||| || ||||| Sbjct 963 AAGATTCAGGATAAGGAAGGGATCCCTCCGGACCAGCAACGTCTGATTTTCGCTGGCAAG 1022 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 ||||| ||||||| | | | || |||||| ||||||||||| ||||| || | ||| Sbjct 1023 CAACTTGAAGATGGGCGCACCCTCTCCGACTACAACATTCAAAAGGAATCAACACTTCAT 1082 Query 26973 CTGGTCCTGAGACTTAGAGGAGG 26995 |||| || | || |||| || Sbjct 1083 TTGGTGTTGCGTCTCCGAGGTGG 1105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478650230008480