Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1793 410 3e-109 >seq1793 Length=11804 Score = 410 bits (454), Expect = 3e-109 Identities = 1161/1753 (66%), Gaps = 48/1753 (3%) Strand=Plus/Plus Query 363431 TCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCC 363490 |||| || | ||||| || || || ||||||||| | |||||||| ||| | || ||| Sbjct 6789 TCAACGGCAAGATTGTCGAGCGACCCCAGCATATGATTATGCGTGTCGCTGTCGGCATCT 6848 Query 363491 ATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT---GCTCGTGTAT 363547 || | |||| || |||||||| || || || | || || || | | Sbjct 6849 GGGGCGACAACATTGAGCGCGTCATTGAAACGTACAACCTCAT--GTCCAGCAAGT-TCT 6905 Query 363548 TCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607 |||| |||||| | || || | | ||||||||| |||| | | ||| |||| || | Sbjct 6906 TCACCCACGCCTCTCCGACCCTTTTCAATGCTGGTACTCCCCAGGCCCAGCTGTCATCCT 6965 Query 363608 GCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATT 363667 |||| || | | |||||||| || ||||||||| |||| |||||| || |||| | Sbjct 6966 GCTTCCTCGTCGACATGAAGGATGACAGCATCGAGGGCATCTATGACACGCTCAAGACCT 7025 Query 363668 GTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC- 363725 | || | || ||||| | || ||||| ||||| | | || ||||| | ||||| Sbjct 7026 GCGCCATGATCTCCAAAATGGCTGGCGGCATTGGCCTCAACG-TCCACCGCATCCGTGCC 7084 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTC 363784 || | | |||||| ||||| || |||| | ||||| | |||||||||| | Sbjct 7085 ACTGG-CTCATACATTGCTGGCACCAACGG-TACTTCCAATGGCGTCATTCCCATGCTCC 7142 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 | ||||| |||| || || || || || ||||||||||| ||||| ||| || | Sbjct 7143 GAGTGTTCAACAACACGGCCAGATATGTAGACCAGGGTGGCAACAAGCGACCAGGTGCCT 7202 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 |||| || || || |||||| || || ||| | |||||||| || || || || || | Sbjct 7203 TTGCCATCTACCTGGAGCCTTGGCACGCTGATGTCTTTGAGTTCCTCGACCTACGTAAGA 7262 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || ||||| | || || || || || ||| || || ||| | |||| | Sbjct 7263 ACCACGGCAAGGAGGAGGTTCGCGCGCGGGACCTTTTCCTCGCCCTGTGGATCCCTGATC 7322 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATG 364022 || |||||||| || ||| | | | | | ||| | ||| | || || | || || Sbjct 7323 TCTTCATGAAGCGTGTCGAG--AAGAACGGCGACTGGACTCTCATGTGTCCCAATGAGTG 7380 Query 364023 TCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAA 364080 || || ||| |||| || ||||| ||| || | || ||||| ||||||||||| || Sbjct 7381 CCCCGGCCTTGCCGACTGCTATGG--TGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAG 7438 Query 364081 TCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGAT 364140 ||||| |||| ||| ||||| || | ||| |||||||| |||| |||| |||| Sbjct 7439 CGTGAGGGCAAGGGTCGCAAGACCATCCGCGCCCAGAAGCTCTGGTACTCCATTTTGGAA 7498 Query 364141 TCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCC 364200 | |||| |||||| || | |||| ||| | ||||| ||| | |||||| ||| | Sbjct 7499 GCTCAGACTGAGACCGGCAACCCCTTCATGCTCTACAAGGATGCTTGCAACAAGAAGAGC 7558 Query 364201 AACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATA 364259 |||||| || |||| || || | |||| || | || || || || |||||||| ||||| Sbjct 7559 AACCAGAAGAACCTAGGAACCA-TCAGAAGTTCTAATCTCTGCACGGAGATTATCGAATA 7617 Query 364260 CACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 | |||| || |||||| ||||| || |||||||| ||| |||| ||||| || ||||| Sbjct 7618 CTCCGCCCCGGACGAGGTGGCCGTCTGCAACCTTGCTTCGCTCGCCCTTCCTGCCTTTGT 7677 Query 364320 ------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCT 364371 || || | | | |||| ||| | || ||||||| || | || || | Sbjct 7678 TGACTACAACGAGGCTCGATATGACTTTCAGAAGCTGCATGACGTGACTCAGGTCGTGGT 7737 Query 364372 ACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG---- 364426 | |||| || ||||| | |||||| || |||| || | | || || || Sbjct 7738 CC--GCAACCTAAACAAGATCATCGACGTCAACCATTACCCCGTGCAGGAGGCTCGCAAC 7795 Query 364427 AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTT 364486 ||| || ||||| || | || || ||| | ||||| ||||| || || |||| | Sbjct 7796 AGC-----AACATGCGCCACAGACCCATCGGTGTCGGTGTTCAGGGTCTTGCCGACGCCT 7850 Query 364487 TTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCT 364546 | | ||| || | ||||| || || || ||||||| | || ||| |||| | Sbjct 7851 TCCTCGCTCTCCGTCTGCCCTTTGAGTCACCCGAGGCTCGTGAGTTGAACAAGCAGATTT 7910 Query 364547 TTGAAACAATGTATTTTGCCGCAATGACTGC-TTCGTGTGATTTGGCAAAAACCAAGGGA 364605 | || || | || ||| | ||||||| | | || ||| ||| | | |||| Sbjct 7911 TCGAGACCGTCTACCACGCCTCCTTGACTGCGTCCATGGAGCTTGCCAAGGAGC-AGGGT 7969 Query 364606 AAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGG 364665 || || || | ||| || || ||| ||| |||| | |||||||||| | ||| Sbjct 7970 CCTTATTCCACCTTTGAAGGATCACCTGCCTCGGAGGGTATTCTCCAGTTTGACATGTGG 8029 Query 364666 AATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCA 364724 || |||| ||| |||| | ||| | ||||| | || | | ||| | ||| |||| Sbjct 8030 AACGTCAAGCCTTCTGAACTGTGGGAATGGGACAATCTGAAGGAGCAA-ATCAAGGAGCA 8088 Query 364725 TGGTACTCGCAACTCCCTCGTTAC-AGCGCCCATGCCCACGGCTTCTACTGCACAGATCC 364783 ||||| ||||||| ||| ||| | || |||||||||||||| || || | ||||||| Sbjct 8089 TGGTATCCGCAACT-CCTTGTTGCTTGCTCCCATGCCCACGGCCTCGACCTCTCAGATCC 8147 Query 364784 TCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTT 364843 |||| ||||| ||||| ||||| || | || ||| | || ||||| || | Sbjct 8148 TCGGCAACAATGAGTGTTTCGAGCCATACACGTCCAACATCTACCAGCGCCGTGTCTTGG 8207 Query 364844 CCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGT 364903 | || || || | ||| || || || || ||||||| || |||| || |||| Sbjct 8208 CTGGGGAGTTCCAGGTCGTGAACCCGTGGCTCCTCAAGGACCTGGTCGACATGGGTCTGT 8267 Query 364904 GGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAG 364963 || || |||||||||| ||||| |||| || || || | || |||||||| Sbjct 8268 GGTCCGATGCCATGAAGAACCGCATCATTGCCGAGAACGGATCCATCCAAAACATTCCCA 8327 Query 364964 GATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC 365023 | || | || | ||| | | ||||| ||||| ||||| ||||| ||| Sbjct 8328 ACATCCCTGCCGACATCAAGGCGCTCTACAAGACCGTTTGGGAGATTTCGCAGCGTCAGG 8387 Query 365024 TCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTAT 365083 | || | ||||| ||||| ||||| || || || ||| |||||| | ||| | Sbjct 8388 TTGTTCAGATGGCCGCCGACCGCGGCGCCTTCATTGACCAGTCGCAGTCGCTGAACATCC 8447 Query 365084 TCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCG 365143 ||||| | || || | ||| | || || ||||| || ||| ||||| | Sbjct 8448 ACATGAAAGACCCCACGATGGGCAAAATCACCTCGATGCACTTTGCCGGCTGGAAGCTGG 8507 Query 365144 GTCTTAAGACAGG 365156 |||| ||||| || Sbjct 8508 GTCTCAAGACGGG 8520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303319633790588