Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 118 9e-22
seq1479 89.7 4e-13
>seq1893
Length=9943
Score = 118 bits (130), Expect = 9e-22
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074
||||| || | |||||| |||| || ||| || |||||| || || | ||||| |
Sbjct 903 ACTGGCAAGACCATTACCCTCGAGGTTGAGTCCTCCGACACTATTGACAACGTCAAGTCA 962
Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134
|||||| || || ||||| || ||||| || || || | ||||||| || ||||||
Sbjct 963 AAGATTCAGGATAAGGAAGGGATCCCTCCGGACCAGCAACGTCTGATTTTCGCTGGCAAG 1022
Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194
||||| ||||||| | | | || ||| || ||||||||||| ||||| ||| |||||
Sbjct 1023 CAACTTGAAGATGGGCGCACCCTCTCCGACTACAACATTCAAAAGGAATCAACACTTCAT 1082
Query 24195 TTAGTGTT 24202
|| |||||
Sbjct 1083 TTGGTGTT 1090
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || ||| | || || || | || ||| | || |||||| | |
Sbjct 576 ATGCAGATTTTCGTGAAGACACTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCC 635
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| ||||||| ||||| || ||||| ||||| || ||
Sbjct 636 GACACCATCGACAATGTCAAGTCAAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 695
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| ||||||||| || ||||||||||||||||||| | | | | ||| || |||
Sbjct 696 CAGCGACTGATTTTCGCTGGCAAGCAACTCGAAGATGGCCGTACTCTGTCCGACTACAAC 755
Query 24171 ATTCAAAAAGAATCTAC 24187
|| || || ||||||||
Sbjct 756 ATCCAGAAGGAATCTAC 772
>seq1479
Length=130260
Score = 89.7 bits (98), Expect = 4e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074
|| || ||| | || ||| |||| |||||| || ||||||||||| | |||||
Sbjct 49610 ACGGGTAAAACCATCACCCTCGAGGTCGAGTCCTCTGACACCATCGACAATGTCAAGTCT 49551
Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134
|| || ||||| || || || ||||| || || ||| || |||||| || |||||||
Sbjct 49550 AAAATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGATTGATTTTCGCCGGCAAG 49491
Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAA 24178
|||||||| |||| | ||| | | ||| || || || |||||
Sbjct 49490 CAACTCGAGGATGGCCGAACCCTGTCCGACTACAATATCCAAAA 49447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429925342155270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |