Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq1893 98.7 8e-16 >seq1893 Length=9943 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 115298 GTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGCGACACTGTTGGA 115357 ||||| || || || || || ||||||||| |||| |||||| ||||||| ||| | Sbjct 891 GTCAAGACCCTGACTGGCAAGACCATTACCCTCGAGGTTGAGTCCTCCGACACTATTG-A 949 Query 115358 CAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTAT 115416 ||| || || ||| ||| ||||| ||||| |||| || |||||| | || || Sbjct 950 CAACGTCAAGTCAAAGATTCAGGATAAGGAAGGGATCCCTCCGGACCAGCAACGTCTGAT 1009 Query 115417 TTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAACATTCAAAAAGA 115476 || || ||||| ||| | ||||||| ||| | |||| || ||||||||||| || Sbjct 1010 TTTCGCTGGCAAGCAACTTGAAGATGGGCGCACCCTCTCCGACTACAACATTCAAAAGGA 1069 Query 115477 GTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 || || | ||| |||||||| | | ||||| || Sbjct 1070 ATCAACACTTCATTTGGTGTTGCGTCTCCGAGGTGG 1105 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||||||||| | || || || || |||||| | || ||| ||||| Sbjct 1107 ATGCAAATTTTTGTCAAAACCTTGACAGGCAAGACAATTACCTTGGAGGTGGAATCCAGT 1166 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| || ||||| || || |||||| ||||| ||||| | || ||||| Sbjct 1167 GATACTATT-GACAACGTCAAGTCTAAAATTCAAGATAAGGAAGGTATTCCTCCGGATCA 1225 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | || |||| ||| || || || || ||||||| || || |||||| || Sbjct 1226 GCAACGTCTCATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACTCTGAGCGATTACAA 1285 Query 115465 CATTCAAAAAGAG 115477 ||| || || ||| Sbjct 1286 CATCCAGAAGGAG 1298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425333455988080