Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq1893 104 2e-17 >seq1893 Length=9943 Score = 104 bits (114), Expect = 2e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||||||||||||||| |||| ||||| || |||||| |||| |||| |||| Sbjct 1107 ATGCAAATTTTTGTCAAAACCTTGACAGGCAAGACAATTACCTTGGAGGTGGAATCCAGT 1166 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| || ||| | | || || |||||| || || ||||| |||| ||||| Sbjct 1167 GATACTATTGACAACGTCAAGTCTAAAATTCAAGATAAGGAAGGTATTCCTCCGGATCAG 1226 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || |||| ||| || || || ||||||||| | ||| || |||||| || Sbjct 1227 CAACGTCTCATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACTCTGAGCGATTACAAC 1286 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGG-TGGCAAT 111417 || || || || || || ||| | || | || ||||| || |||||| Sbjct 1287 ATCCAGAAGGAGAGCACCCTGCATCTCGTTCTTCGCCTGCGTGGAGGGCAAT 1338 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 111199 GTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGC 111258 ||||| || |||| ||||| ||||||||| | || || || ||| || ||| | Sbjct 891 GTCAAGACCCTGACTGGCAAGACCATTACCCTCGAGGTTGAGTCCTCCGACACTATTGAC 950 Query 111259 CAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCG-ATCAACAAAGGCTTAT 111317 | || || ||| ||| || || ||||| | |||| || | || ||| | || || Sbjct 951 AACGTCAAGTCAAAGATTCAGGATAAGGAAGG-GATCCCTCCGGACCAGCAACGTCTGAT 1009 Query 111318 TTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGA 111377 || || ||||| ||| | |||||| || | |||| || || || ||||| || Sbjct 1010 TTTCGCTGGCAAGCAACTTGAAGATGGGCGCACCCTCTCCGACTACAACATTCAAAAGGA 1069 Query 111378 ATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 ||| ||||| ||||| ||||||||||| || ||||||| Sbjct 1070 ATCAACACTTCATTTGGTGTTGCGTCTCCGAGGTGGCA 1107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423029513102800