Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 104 2e-17
>seq1893
Length=9943
Score = 104 bits (114), Expect = 2e-17
Identities = 163/232 (70%), Gaps = 1/232 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
|||||||||||||||||||| |||| ||||| || |||||| |||| |||| ||||
Sbjct 1107 ATGCAAATTTTTGTCAAAACCTTGACAGGCAAGACAATTACCTTGGAGGTGGAATCCAGT 1166
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
||| || ||| | | || || |||||| || || ||||| |||| |||||
Sbjct 1167 GATACTATTGACAACGTCAAGTCTAAAATTCAAGATAAGGAAGGTATTCCTCCGGATCAG 1226
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
||| | || |||| ||| || || || ||||||||| | ||| || |||||| ||
Sbjct 1227 CAACGTCTCATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACTCTGAGCGATTACAAC 1286
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGG-TGGCAAT 111417
|| || || || || || ||| | || | || ||||| || ||||||
Sbjct 1287 ATCCAGAAGGAGAGCACCCTGCATCTCGTTCTTCGCCTGCGTGGAGGGCAAT 1338
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/218 (69%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 111199 GTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGC 111258
||||| || |||| ||||| ||||||||| | || || || ||| || ||| |
Sbjct 891 GTCAAGACCCTGACTGGCAAGACCATTACCCTCGAGGTTGAGTCCTCCGACACTATTGAC 950
Query 111259 CAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCG-ATCAACAAAGGCTTAT 111317
| || || ||| ||| || || ||||| | |||| || | || ||| | || ||
Sbjct 951 AACGTCAAGTCAAAGATTCAGGATAAGGAAGG-GATCCCTCCGGACCAGCAACGTCTGAT 1009
Query 111318 TTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGA 111377
|| || ||||| ||| | |||||| || | |||| || || || ||||| ||
Sbjct 1010 TTTCGCTGGCAAGCAACTTGAAGATGGGCGCACCCTCTCCGACTACAACATTCAAAAGGA 1069
Query 111378 ATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415
||| ||||| ||||| ||||||||||| || |||||||
Sbjct 1070 ATCAACACTTCATTTGGTGTTGCGTCTCCGAGGTGGCA 1107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423029513102800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |