Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1919 104 5e-17 >seq1919 Length=9696 Score = 104 bits (114), Expect = 5e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 280161 TCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTG 280220 || || |||| |||||||| ||||| ||||| || ||||| ||||| ||||| ||| || Sbjct 3483 TCCCGTATTGCCGTCATTGGTCCCAACGGTGCTGGCAAGTCGACCCTGATCAACGTCTTG 3424 Query 280221 ACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCT 280280 || || ||| | |||| |||| | | |||| ||||| || || || Sbjct 3423 ACCGGTGAGCTCATCCCCACGCAGGGTGAGATCTACCAGCACGAAAACATCCGTATCGCG 3364 Query 280281 TACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAA 280340 ||| || |||||||||||| |||||| || || || |||||| |||||| | | Sbjct 3363 TACATCAAACAGCACGCTTTCGCCCACATTGACAATCATTTGGACAAGACTCCATCCGAG 3304 Query 280341 TACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 |||||||||||||| | | || | ||| |||||| ||| | ||||||| Sbjct 3303 TACATTCAGTGGCG-TTTCCAGACTGGTGAGGATCGCGAGACCATGGATCG 3254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027810013930594