Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1745 123 6e-23
seq1479 89.7 1e-12
>seq1745
Length=53961
Score = 123 bits (136), Expect = 6e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||| ||||| |||| || || | || | ||||| || || || || || ||||||
Sbjct 17003 TCCCCCGCGCAGTCGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCT 17062
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| ||||| || || || | ||||| || || ||||| || ||||| ||| ||
Sbjct 17063 CAGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGG 17122
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
||||||||| || ||||| || || | || || || || || | ||| || || ||
Sbjct 17123 GATTCCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCAC 17182
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| |||||||||||||| ||||| || |||||||| ||||||||
Sbjct 17183 CTCGAGGGTGATCGTCTTCCCCGTCAGGGTTTTGACGAAGATCTGCAT 17230
>seq1479
Length=130260
Score = 89.7 bits (98), Expect = 1e-12
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
||||||||||| ||||||| || || || || || || | ||| || || ||||| |||
Sbjct 49447 TTTTGGATATTGTAGTCGGACAGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCGAAAATC 49506
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
| ||||| || | || || || || || ||||||||||| | || || || ||
Sbjct 49507 AATCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATTTTAGACTTGACATTGTCG 49566
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | || || || || ||||| ||||| || || || ||||| ||||| |||||
Sbjct 49567 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTTTTACCCGTCAGCGTCTTCACGAA 49625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179623657469052
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |