Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 122 9e-23
seq1745 86.0 6e-12
>seq1893
Length=9943
Score = 122 bits (134), Expect = 9e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || |||| | ||| || ||||| | || || || || |||||||||||
Sbjct 1333 CCTCCACGCAGGCGAAGAACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAATCGCTC 1274
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||||| | ||||| | |||||| || ||| ||||||| || ||||| || ||||||
Sbjct 1273 AGAGTGCGACCATCTTCCAACTGCTTTCCAGCAAAAATGAGACGTTGCTGATCCGGAGGA 1214
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|| ||||| || ||||| ||||| ||| || || | ||||||| || |||||
Sbjct 1213 ATACCTTCCTTATCTTGAATTTTAGACTTGACGTTGTCAATAGTATCACTGGATTCCACC 1154
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||| ||||| ||||| || |||||||||||
Sbjct 1153 TCCAAGGTAATTGTCTTGCCTGTCAAGGTTTTGACAAAAATTTGCAT 1107
Score = 113 bits (124), Expect = 5e-20
Identities = 145/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293
||| | ||||| || ||||| |||||||||||||| || | || ||||||| | |||||
Sbjct 1088 CACCAAATGAAGTGTTGATTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGCCCATCTTC 1029
Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353
||| |||||||| || |||| || || |||||||| ||||| || ||||| || || ||
Sbjct 1028 AAGTTGCTTGCCAGCGAAAATCAGACGTTGCTGGTCCGGAGGGATCCCTTCCTTATCCTG 969
Query 64354 TATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413
|| ||| ||| || || | || || || || || || | || | ||||||
Sbjct 968 AATCTTTGACTTGACGTTGTCAATAGTGTCGGAGGACTCAACCTCGAGGGTAATGGTCTT 909
Query 64414 GCCGGTCAAAGTTTTTACGA 64433
||| |||| || || ||||
Sbjct 908 GCCAGTCAGGGTCTTGACGA 889
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | ||| ||||| || || |||||||| || | | || || | |||
Sbjct 787 AGGACGAGATGCAGCGTAGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCT 728
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| || |||||||| || |||| || ||||||||||| ||||| || || || || ||
Sbjct 727 TCGAGTTGCTTGCCAGCGAAAATCAGTCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 668
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || ||| ||| ||| || | || || | || || || | || | ||||
Sbjct 667 TGAATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGACCTCAAGGGTGATGGTC 608
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||||||| | || || |||||||| |||||
Sbjct 607 TTGCCGGTGAGTGTCTTCACGAAAATCTGCAT 576
>seq1745
Length=53961
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||||| || ||||| | || | || || || ||||||||||| ||
Sbjct 17004 CCCCCGCGCAGTCGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTC 17063
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| |||||| | || || ||||| ||||| ||| | ||||| |||||||| || || ||
Sbjct 17064 AGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGGG 17123
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|||||||| || || || || || ||| ||| || | || || | |||||
Sbjct 17124 ATTCCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACC 17183
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|| | || | ||||| || |||| ||||| ||||| || ||||| ||
Sbjct 17184 TCGAGGGTGATCGTCTTCCCCGTCAGGGTTTTGACGAAGATCTGCATCTT 17233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499632096530960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |