Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1793 255 6e-63 >seq1793 Length=11804 Score = 255 bits (282), Expect = 6e-63 Identities = 607/915 (66%), Gaps = 2/915 (0%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 |||||| | ||||||| |||||| ||||||||| ||||||||||| ||| | | ||| Sbjct 6737 AATTACCAGTACTTTGGCTTCAAGACTCTGGAGCGATCGTACCTCCTGAAGCTCAACGGC 6796 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||||||||| || || || | ||||| ||||| |||| || ||| || Sbjct 6797 AAGATTGTCGAGCGACCCCAGCATATGATTATGCGTGTCGCTGTCGGCATCTGGGGCGAC 6856 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 |||| | || | | | || |||| |||| | ||| ||| Sbjct 6857 AACATTGAGCGCGTCATTGAAACGTACAACCTCATGTCCAGCAAGTTCTTCACCCACGCC 6916 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 | |||||||| ||||| || || || || | | ||| |||| || || ||||| | Sbjct 6917 TCTCCGACCCTTTTCAATGCTGGTACTCCCCAGGCCCAGCTGTCATCCTGCTTCCTCGTC 6976 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||| |||| || || | |||| |||||| ||| || | || Sbjct 6977 GAC-ATGAAGGATGACAGCATCGAGGGCATCTATGACACGCTCAAGACCTGCGCCATGAT 7035 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| ||| || || || || || ||| |||||| | | ||||||| || || || Sbjct 7036 CTCCAAAATGGCTGGCGGCATTGGCCTCAACGTCCACCGCATCCGTGCCACTGGCTCATA 7095 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| || ||||| || || ||||| ||| || | || |||||||| || |||||||| Sbjct 7096 CATTGCTGGCACCAACGGTACTTCCAATGGCGTCATTCCCATGCTCCGAGTGTTCAACAA 7155 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | |||| | || || ||||||||||| | | | ||| | || || |||| || Sbjct 7156 CACGGCCAGATATGTAGACCAGGGTGGCAACAAGCGACCAGGTGCCTTTGCCATCTACCT 7215 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||| |||||||| || || | ||| ||||||| || |||||||||||||| || Sbjct 7216 GGAGCCTTGGCACGCTGATGTCTTTGAGTTCCTCGACCTACGTAAGAACCACGGCAAGGA 7275 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | || | ||||| ||| ||| || ||| | || || || || ||||| || Sbjct 7276 GGAGGTTCGCGCGCGGGACCTTTTCCTCGCCCTGTGGATCCCTGATCTCTTCATGAAGCG 7335 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 |||||||| ||| || ||||| ||| | ||||||||||| || ||||| || |||| Sbjct 7336 TGTCGAGAAGAACGGCGACTGGACTCTCATGTGTCCCAATGAGTGCCCCGGCCTTGCCGA 7395 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 | | ||| | ||||| | |||| | ||||| ||||||||| | Sbjct 7396 CTGCTATGGTGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGCGTGAGGGCAAGGGTCG 7455 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 ||| || || |||||| ||| | || |||| | ||| ||||| || Sbjct 7456 CAAGACCATCCGCGCCCAGAAGCTCTGGTACTCCATTTTGGAAGCTCAGACTGAGACCGG 7515 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | |||| ||| | | |||||| || |||| ||| ||||||| || |||| || Sbjct 7516 CAACCCCTTCATGCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTAGG 7575 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 |||| || || ||||| ||||| |||||| |||| || | | ||||||||| | Sbjct 7576 AACCATCAGAAGTTCTAATCTCTGCACGGAGATTATCGAATACTCCGCCCCGGACGAGGT 7635 Query 94614 TGCTGTGTGTAACCT 94628 || || || ||||| Sbjct 7636 GGCCGTCTGCAACCT 7650 Score = 140 bits (154), Expect = 3e-28 Identities = 197/273 (72%), Gaps = 8/273 (3%) Strand=Plus/Plus Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 || ||||||||||||||||| || | |||||||| |||||||| |||| ||||| || Sbjct 8114 GCTCCCATGCCCACGGCCTCGACCTCTCAGATCCTCGGCAACAATGAGTGTTTCGAGCCA 8173 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 | ||| |||||| | ||| | | || || | || ||||| |||| ||| | ||| | Sbjct 8174 TACACGTCCAACATCTACCAGCGCCGTGTCTTGGCTGGGGAGTTCCAGGTCGTGAACCCG 8233 Query 95224 CACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGG---GGTGACAAGGTCAAGAACCA 95279 ||||| |||||| | || | ||||| ||||| | || || | ||||||| Sbjct 8234 TGGCTCCTCAAGGACCTGGTCGAC-ATGGGTCTGTGGTCCGATGCCA---TGAAGAACCG 8289 Query 95280 ACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGC 95339 | | || ||||| ||| |||| ||||| || | || || | ||||||||||| Sbjct 8290 CATCATTGCCGAGAACGGATCCATCCAAAACATTCCCAACATCCCTGCCGACATCAAGGC 8349 Query 95340 GCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 ||||||||||||||| |||||||| ||||||| Sbjct 8350 GCTCTACAAGACCGTTTGGGAGATTTCGCAGCG 8382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494710621662640