Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 255 6e-63
>seq1793
Length=11804
Score = 255 bits (282), Expect = 6e-63
Identities = 607/915 (66%), Gaps = 2/915 (0%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|||||| | ||||||| |||||| ||||||||| ||||||||||| ||| | | |||
Sbjct 6737 AATTACCAGTACTTTGGCTTCAAGACTCTGGAGCGATCGTACCTCCTGAAGCTCAACGGC 6796
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||||||| || || || | ||||| ||||| |||| || ||| ||
Sbjct 6797 AAGATTGTCGAGCGACCCCAGCATATGATTATGCGTGTCGCTGTCGGCATCTGGGGCGAC 6856
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|||| | || | | | || |||| |||| | ||| |||
Sbjct 6857 AACATTGAGCGCGTCATTGAAACGTACAACCTCATGTCCAGCAAGTTCTTCACCCACGCC 6916
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
| |||||||| ||||| || || || || | | ||| |||| || || ||||| |
Sbjct 6917 TCTCCGACCCTTTTCAATGCTGGTACTCCCCAGGCCCAGCTGTCATCCTGCTTCCTCGTC 6976
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||| |||| || || | |||| |||||| ||| || | ||
Sbjct 6977 GAC-ATGAAGGATGACAGCATCGAGGGCATCTATGACACGCTCAAGACCTGCGCCATGAT 7035
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
||| ||| || || || || || ||| |||||| | | ||||||| || || ||
Sbjct 7036 CTCCAAAATGGCTGGCGGCATTGGCCTCAACGTCCACCGCATCCGTGCCACTGGCTCATA 7095
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
||| || ||||| || || ||||| ||| || | || |||||||| || ||||||||
Sbjct 7096 CATTGCTGGCACCAACGGTACTTCCAATGGCGTCATTCCCATGCTCCGAGTGTTCAACAA 7155
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| |||| | || || ||||||||||| | | | ||| | || || |||| ||
Sbjct 7156 CACGGCCAGATATGTAGACCAGGGTGGCAACAAGCGACCAGGTGCCTTTGCCATCTACCT 7215
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||| |||||||| || || | ||| ||||||| || |||||||||||||| ||
Sbjct 7216 GGAGCCTTGGCACGCTGATGTCTTTGAGTTCCTCGACCTACGTAAGAACCACGGCAAGGA 7275
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | || | ||||| ||| ||| || ||| | || || || || ||||| ||
Sbjct 7276 GGAGGTTCGCGCGCGGGACCTTTTCCTCGCCCTGTGGATCCCTGATCTCTTCATGAAGCG 7335
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|||||||| ||| || ||||| ||| | ||||||||||| || ||||| || ||||
Sbjct 7336 TGTCGAGAAGAACGGCGACTGGACTCTCATGTGTCCCAATGAGTGCCCCGGCCTTGCCGA 7395
Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433
| | ||| | ||||| | |||| | ||||| ||||||||| |
Sbjct 7396 CTGCTATGGTGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGCGTGAGGGCAAGGGTCG 7455
Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493
||| || || |||||| ||| | || |||| | ||| ||||| ||
Sbjct 7456 CAAGACCATCCGCGCCCAGAAGCTCTGGTACTCCATTTTGGAAGCTCAGACTGAGACCGG 7515
Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553
| |||| ||| | | |||||| || |||| ||| ||||||| || |||| ||
Sbjct 7516 CAACCCCTTCATGCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTAGG 7575
Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613
|||| || || ||||| ||||| |||||| |||| || | | ||||||||| |
Sbjct 7576 AACCATCAGAAGTTCTAATCTCTGCACGGAGATTATCGAATACTCCGCCCCGGACGAGGT 7635
Query 94614 TGCTGTGTGTAACCT 94628
|| || || |||||
Sbjct 7636 GGCCGTCTGCAACCT 7650
Score = 140 bits (154), Expect = 3e-28
Identities = 197/273 (72%), Gaps = 8/273 (3%)
Strand=Plus/Plus
Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163
|| ||||||||||||||||| || | |||||||| |||||||| |||| ||||| ||
Sbjct 8114 GCTCCCATGCCCACGGCCTCGACCTCTCAGATCCTCGGCAACAATGAGTGTTTCGAGCCA 8173
Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223
| ||| |||||| | ||| | | || || | || ||||| |||| ||| | ||| |
Sbjct 8174 TACACGTCCAACATCTACCAGCGCCGTGTCTTGGCTGGGGAGTTCCAGGTCGTGAACCCG 8233
Query 95224 CACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGG---GGTGACAAGGTCAAGAACCA 95279
||||| |||||| | || | ||||| ||||| | || || | |||||||
Sbjct 8234 TGGCTCCTCAAGGACCTGGTCGAC-ATGGGTCTGTGGTCCGATGCCA---TGAAGAACCG 8289
Query 95280 ACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGC 95339
| | || ||||| ||| |||| ||||| || | || || | |||||||||||
Sbjct 8290 CATCATTGCCGAGAACGGATCCATCCAAAACATTCCCAACATCCCTGCCGACATCAAGGC 8349
Query 95340 GCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
||||||||||||||| |||||||| |||||||
Sbjct 8350 GCTCTACAAGACCGTTTGGGAGATTTCGCAGCG 8382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494710621662640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |