Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1793 143 3e-29 seq1923 131 2e-25 seq1745 129 6e-25 seq1893 109 5e-19 seq1479 93.3 4e-14 >seq1793 Length=11804 Score = 143 bits (158), Expect = 3e-29 Identities = 674/1060 (64%), Gaps = 29/1060 (3%) Strand=Plus/Minus Query 153408 AAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGC 153467 ||||||||||| |||||||| | |||||| |||||||||| || | ||||||| Sbjct 7851 AAGGCGTCGGCAAGACCCTGAACACCGACACCGATGGGTCTGTGGCGCATGTTGCTGTTG 7792 Query 153468 CTCGCGCTCGCT--ATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCA 153525 | || ||| || | ||| || || ||| ||||| || ||||| |||||||| |||| Sbjct 7791 CGAGC-CTC-CTGCACGGGGTAATGGTTGACGTCGATGATCTTGTTTAGGTTGCGGACCA 7734 Query 153526 CCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCGTCGACGCGTACGC 153585 | || | ||| | | | || |||| || ||||| |||| | | || Sbjct 7733 CGACCTGAGTCACGTCATGCAGCTTCTGAAAGTCATATCGAGCCTCGTTGTAGTCAACAA 7674 Query 153586 ATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACT 153645 | | | ||| | || || || || ||||||||| ||| || | | || ||| | Sbjct 7673 AGGCAGGAAGGGCGAGCGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATT 7614 Query 153646 GCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTT 153705 | ||||| | |||||| || | | | ||| || | || | ||| ||||| | Sbjct 7613 CGATAATCTCCGTGCAGAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCT 7554 Query 153706 TGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGA 153765 | ||||| || || ||| |||||||| | || ||||||||| || | ||| | Sbjct 7553 TCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCA 7494 Query 153766 CGATAAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGT 153825 || | || | ||| || || | || ||| |||||| | ||||| Sbjct 7493 AAATGGAGTACCAGAGCTTCTGGGCGCGGATGGTCTTGCGACCCTTGCCCTCACGCTCGT 7434 Query 153826 ATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGAT 153885 | |||||||| ||||||||| || || ||||||||||| |||||||| |||| || Sbjct 7433 ACTTTTCGTACAGAGCCTCAAACTCCTCACCATAGCAGTCGGCAAGGCCGGGGCACTCAT 7374 Query 153886 GCGGACACATCAGCGACCACATATCGTCGGCGTT------GACGCGTCGCATGAACAGAT 153939 |||||||| || | ||| |||| |||| ||| || |||||| |||| Sbjct 7373 TGGGACACATGAGAGTCCA------GTCGCCGTTCTTCTCGACACGCTTCATGAAGAGAT 7320 Query 153940 CCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGC--GCCCATGTT 153997 | || | ||| || ||| | ||||| ||||| || | ||||| | || || | Sbjct 7319 CAGGGATCCACAGGGCGAGGAAAAGGTCCCGCGC---GCGAACCTCCTCCTTGCCGTGGT 7263 Query 153998 GCGTTTC--AGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCC 154055 | || | || | ||| | | ||| || |||||||| || || | ||||| ||| Sbjct 7262 TC-TTACGTAGGTCGAGGAACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCA 7204 Query 154056 AGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACG 154112 | ||||||| ||| || || ||||| || || | | || | |||||||| || Sbjct 7203 AAGGCACCTGGTCGCTTGTTGCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACT 7144 Query 154113 CGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGG 154172 || | |||||| | ||| | | || |||||||| | || | ||| | Sbjct 7143 CGGAGCATGGGAATGACGCCATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTG 7084 Query 154173 GCGCGCACTTGATGCACGTTAACGCCAATGCCGCC-GCCGTACTTTGATATGGCAGCGCA 154231 || || | | || ||||| | |||||||||||| ||| | || || || ||||| Sbjct 7083 GCACGGATGCGGTGGACGTTGAGGCCAATGCCGCCAGCCAT-TTTGGAGATCATGGCGCA 7025 Query 154232 GTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACA 154291 | ||||| |||||||| |||||||| || || | | ||| | ||| || Sbjct 7024 GGTCTTGAGCGTGTCATAGATGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCA 6965 Query 154292 CGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAA 154351 || ||| || | | | || || || || ||||| ||| ||||| || || Sbjct 6964 GGATGACAGCTGGGCCTGGGGAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAA 6905 Query 154352 CAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAAT 154411 | || | ||| | | ||||||||| ||| || || || | ||||| || Sbjct 6904 GAACTTGCTGGACATGAGGTTGTACGTTTCAATGACGCGCTCAATGTTGTCGCCCCAGAT 6845 Query 154412 GCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCG 154451 ||||| ||||| ||||| | ||| ||||| || || ||| Sbjct 6844 GCCGACAGCGACACGCATAATCATATGCTGGGGTCGCTCG 6805 >seq1923 Length=107003 Score = 131 bits (144), Expect = 2e-25 Identities = 343/514 (67%), Gaps = 27/514 (5%) Strand=Plus/Minus Query 52336 TTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG---CCACGCTGG 52392 ||||||| ||||| | ||||| || | ||||| || |||| | ||| | | Sbjct 7968 TTCGCAAGAAGGCGGACTGGGCTATTCACTGGATTCAG---GACAAGGAATCCAGCTTCG 7912 Query 52393 CCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCG 52452 || |||| | || ||||| ||| || |||||| | || || |||| ||||||| Sbjct 7911 CCCAGCGATTAGTCGCCTTTGCCGCTGTTGAGGGCATCTTCTTCAGCGGCGCCTTTGCCT 7852 Query 52453 CCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGA 52512 ||||||||| | || | | ||| | |||||||||||||| ||| ||||| | | Sbjct 7851 CCATCTTTTGGCTGAAGAAGCGGGGCTTGATGCCCGGCCTGACCTTCTCTAACGAACTCA 7792 Query 52513 TATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT-CT--ACT---ACAAGACGC 52566 | ||||||||||| || |||||||| |||||||| ||||| || ||| || || || Sbjct 7791 TCTCGCGCGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTGCACTCGCACCTGAAGC 7732 Query 52567 -GCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCT 52625 |||| | | || | | | ||| ||| ||| || || || | Sbjct 7731 ACCGTGCCAGCAA----------GCAGATCATCAAAGACATCATCACCGACGCCGTCACC 7682 Query 52626 ATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAG 52685 ||||| ||||||| | || | || ||||| | || || ||||||||||| | Sbjct 7681 ATCGAGCAGGAGTTCCTGACCGAGGCTTTGCCGTGTGCTCTACTCGGCATGAACGC-TAC 7623 Query 52686 TC-CATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCC 52744 || ||| ||||||| || || || || || || || |||| ||| |||| | Sbjct 7622 TCTGATGAAGCAGTACATTGAATTCGTCGCTGACCGCCTCCTGGTCGCTCTC-GGCAACG 7564 Query 52745 A-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCA 52803 | ||| | ||| | ||| || ||||| || ||| | ||||| || || | |||| Sbjct 7563 AGAAGGTGTACAAGACGGCCAACCCCTTTGATTTCATGGAAAACATCTCACTGGGTGGCA 7504 Query 52804 AGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||||||| || |||||||||||||||||||| Sbjct 7503 AGACCAACTTCTTTGAGAAGCGAGTCGGCGAGTA 7470 >seq1745 Length=53961 Score = 129 bits (142), Expect = 6e-25 Identities = 147/194 (76%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||||||||||| || || |||||||| ||||| || | | | Sbjct 17039 CTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAA 17098 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAAT 138540 ||| || ||||| || ||||| || || ||||| ||||| ||| | || | || || Sbjct 17099 GATGAGTCGCTGCTGATCCGGGGGGATTCCTTCCTTGTC-CTGAATCTTGGACTTGACAT 17157 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||||| ||||||||||||| || | ||| || || ||||| ||||| Sbjct 17158 TG-TCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCCGTCAGGGTTTTG 17216 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 17217 ACGAAGATCTGCAT 17230 >seq1893 Length=9943 Score = 109 bits (120), Expect = 5e-19 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | |||||| || ||||| | |||| ||||||||||||||||||||| Sbjct 1106 GCCACCTCGGAGACGCAACACCAAATGAAGTGTTGATTCCTTTTGAATGTTGTAGTCGGA 1047 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || ||| || || ||||| || || | | || ||||| || ||||||||||| Sbjct 1046 GAGGGTGCGCCCATCTTCAAGTTGCTTGCCAGCGAAAATCAGACGTTGCTGGTCCGGAGG 987 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || ||||| || || ||| | |||| || | ||| || | ||||||| ||||| Sbjct 986 GATCCCTTCCTTATC-CTGAATCTTTGACTTGACGTTG-TCAATAGTGTCGGAGGACTCA 929 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 ||||||| || | || || |||||||| || || || Sbjct 928 ACCTCGAGGGTAATGGTCTTGCCAGTCAGGGTCTTGAC 891 Score = 105 bits (116), Expect = 7e-18 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||||| || | ||| | | || ||||| || |||||||||||| Sbjct 803 GCCACCCCGAAGACGCAGGACGAGATGCAGCGTAGATTCCTTCTGGATGTTGTAGTCGGA 744 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || |||||| || |||||||| || || | | || || ||||| ||||||||||| Sbjct 743 CAGAGTACGGCCATCTTCGAGTTGCTTGCCAGCGAAAATCAGTCGCTGCTGGTCCGGAGG 684 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 || || || ||||| ||| | |||| || | |||| | | |||||||| ||||| Sbjct 683 GATGCCCTCCTTGTCC-TGAATCTTTGACTTGACATTGT-CGATGGTGTCGGATGACTCG 626 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| | || | || || || || || || || || |||||||||||| Sbjct 625 ACCTCAAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACGAAAATCTGCATG 575 >seq1479 Length=130260 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 ||||||| || ||||||||| || || || ||||||||||| || |||| | | Sbjct 49445 CCTTTTGGATATTGTAGTCGGACAGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCGAAAA 49504 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | | ||||| ||||| ||||| ||||| || ||||| |||||| || | |||| Sbjct 49505 TCAATCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATTTTAGACTTGACATTG- 49563 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | |||||| | ||||| ||||||| || | |||||||| ||||| || || || Sbjct 49564 TCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTTTTACCCGTCAGCGTCTTCACG 49623 Query 138604 AAA 138606 ||| Sbjct 49624 AAA 49626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496249782528480