Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 122 8e-23
seq1793 89.7 5e-13
seq1745 89.7 5e-13
seq1479 89.7 5e-13
>seq1893
Length=9943
Score = 122 bits (134), Expect = 8e-23
Identities = 160/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | |||||| | ||| || |||||||||||||| || || || |||
Sbjct 1108 ATGCCACCTCGGAGACGCAACACCAAATGAAGTGTTGATTCCTTTTGAATGTTGTAGTCG 1049
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| ||| || | ||| || || ||| | |||| ||||||||||||||
Sbjct 1048 GAGAGGGTGCGCCCATCTTCAAGTTGCTTGCCAGCGAAAATCAGACGTTGCTGGTCCGGA 989
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || ||||| ||||| ||||| ||| |||| || | || | |||||||| |||||
Sbjct 988 GGGATCCCTTCCTTATCCTGAATCTTTGACTTGA-CGTTGTCAATAGTGTCGGAGGACTC 930
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| ||||| |||| || ||||| || || || || ||
Sbjct 929 AACCTCGAGGGTAATGGTCTTGCCAGTCAGGGTCTTGAC 891
Score = 120 bits (132), Expect = 3e-22
Identities = 167/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || || ||||||||||| |||||||| ||||| || || |||
Sbjct 805 ATGCCACCCCGAAGACGCAGGACGAGATGCAGCGTAGATTCCTTCTGGATGTTGTAGTCG 746
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||| | | | ||| || | ||| || || ||| | |||| ||| ||||||||||
Sbjct 745 --GACAGAGTACGGCCATCTTCGAGTTGCTTGCCAGCGAAAATCAGTCGCTGCTGGTCCG 688
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| || ||||| || || || ||||| ||| |||| || | ||||||||| ||||
Sbjct 687 GAGGGATGCCCTCCTTGTCCTGAATCTTTGACTTGACATTGTCGATGGTGTCGGATGACT 628
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||| || || || | || |||||||| || || || || ||||| |||||
Sbjct 627 CGACCTCAAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACGAAAATCTGCAT 576
Score = 102 bits (112), Expect = 7e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||| || || | | || |||||||| || ||||| ||||| || ||||||||
Sbjct 1333 CCTCCACGCAGGCGAAGAACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAATCGCTC 1274
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| || | ||| ||||| || ||||| || | || | |||||||| ||||| |||
Sbjct 1273 AGAGTGCGACCATCTTCCAACTGCTTTCCAGCAAAAATGAGACGTTGCTGATCCGGAGGA 1214
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292
|| ||||| |||||||||||||| |||| || | || | || || || || ||
Sbjct 1213 ATACCTTCCTTATCTTGAATTTTAGACTTGA-CGTTGTCAATAGTATCACTGGATTCCAC 1155
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| | |||| || ||||| || | ||||| ||||||||||||||
Sbjct 1154 CTCCAAGGTAATTGTCTTGCCTGTCAAGGTTTTGACAAAAATTTGCAT 1107
>seq1793
Length=11804
Score = 89.7 bits (98), Expect = 5e-13
Identities = 210/314 (67%), Gaps = 6/314 (2%)
Strand=Plus/Plus
Query 123445 ACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGCGACGTTTACGGCA 123504
|||||| ||| | |||||||||||| || ||| |||||| | |||| || ||
Sbjct 7347 ACGGCGACTGGACTCTCATGTGTCCCAATGAGTGCCCCGGCCTTGCCGACTGCTATGGTG 7406
Query 123505 ATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAGGTTAGTCAGGT-- 123562
| ||||||| | |||||| | |||||||| || ||||| || | | ||
Sbjct 7407 AGGAGTTTGAGGCTCTGTACGAAAAGTACGAGCGTGAGGGCAA---GGGTCGCAAGACCA 7463
Query 123563 TCCG-GCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACCGGAACGCCGT 123621
|||| || | | | | | | ||| | ||| | || || ||||| | || |
Sbjct 7464 TCCGCGCCCAGAAGCTCTGGTACTCCATTTTGGAAGCTCAGACTGAGACCGGCAACCCCT 7523
Query 123622 ACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTGGGAACAATAA 123681
|||||||||||| || || ||||||| ||| | ||| |||| ||| | ||||| || |
Sbjct 7524 TCATGCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTAGGAACCATCA 7583
Query 123682 AATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAAGTGGCCGTGT 123741
| || |||||| ||| | || |||||||||||| || | || | |||||||| |
Sbjct 7584 GAAGTTCTAATCTCTGCACGGAGATTATCGAATACTCCGCCCCGGACGAGGTGGCCGTCT 7643
Query 123742 GTAATTTGGCTTCG 123755
| || | ||||||
Sbjct 7644 GCAACCTTGCTTCG 7657
>seq1745
Length=53961
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172
||| ||||| || | || ||| | || || || ||||| || || || || |||||
Sbjct 17003 TCCCCCGCGCAGTCGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCT 17062
Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232
| ||| ||| || | ||||| || || | || | ||| ||||| ||||| ||
Sbjct 17063 CAGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGG 17122
Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGAC 45292
|| ||||| || || ||||| || |||| || | ||||||||||||||| ||
Sbjct 17123 GATTCCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCAC 17182
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||||| || | ||| || || || || ||||| || || || ||||||
Sbjct 17183 CTCGAGGGTGATCGTCTTCCCCGTCAGGGTTTTGACGAAGATCTGCATC 17231
>seq1479
Length=130260
Score = 89.7 bits (98), Expect = 5e-13
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 45151 CCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATA 45210
||||||||||||| || ||| | |||| ||| || | ||| || || ||| | |
Sbjct 49445 CCTTTTGGATATTGTAGTCGGACAGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCGAAAA 49504
Query 45211 TCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTT 45270
||||||| |||||||| || ||||| || || || || || ||||| |||| |
Sbjct 49505 TCAATCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATTTTAGACTTGACATTGT 49564
Query 45271 CTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAA 45330
| | |||||| || |||||||| ||||| || | ||||| || || || || || || |
Sbjct 49565 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTTTTACCCGTCAGCGTCTTCACGA 49624
Query 45331 AA 45332
||
Sbjct 49625 AA 49626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451991707818640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |