Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1793 277 2e-69 seq1923 98.7 1e-15 >seq1793 Length=11804 Score = 277 bits (306), Expect = 2e-69 Identities = 1159/1807 (64%), Gaps = 47/1807 (3%) Strand=Plus/Minus Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622 ||||||||| ||||||||||| ||| |||||||| | | ||||| |||| | || Sbjct 8530 GTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATCGAGGTGATTTT 8471 Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 115682 | | || || || |||| || ||||| || || || || |||||| || Sbjct 8470 GCCCATCGTGGGGTCTTTCATGTGGATGTTCAGCGACTGCGACTGGTCAATGAAGGCGCC 8411 Query 115683 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAG 115742 || || || ||||| | || || | | | || ||||| || || ||||||| Sbjct 8410 GCGGTCGGCGGCCATCTGAACAACCTGACGCTGCGAAATCTCCCAAACGGTCTTGTAGAG 8351 Query 115743 GTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCAT 115802 ||| || || | ||||| | || |||||||| || || || | | || Sbjct 8350 CGCCTTGATGTCGGCAGGGATGTTGGGAATGTTTTGGATGGATCCGTT---CTCGGCAAT 8294 Query 115803 GA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTG 115859 || | | |||||| | | ||||| ||||| || | || |||| | ||| Sbjct 8293 GATGCGGTTCTTCATGGCATCGGACCACAGACCCATGTCGACCAGGTCCTTGAGGAGCCA 8234 Query 115860 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTA 115919 | || || || ||||| || || | | || | | | |||||||||| |||||| Sbjct 8233 CGGGTTCACGACCTGGAACTCCCCAGCCAAGACACGGCGCTGGTAGATGTTGGACGTGTA 8174 Query 115920 TGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGC 115979 |||||| || ||||||||||| || | ||| || | || ||||| ||||||||||| || Sbjct 8173 TGGCTCGAAACACTCATTGTTGCCGAGGATCTGAGAGGTCGAGGCCGTGGGCATGGGAGC 8114 Query 115980 CATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGT- 116038 | | | | |||||||| ||| | || | || | ||||| || |||||| | Sbjct 8113 AAGCAACAAGGAGTTGCGGATACCATGCTCCTTGATTTGCTCCTTCAGATTGTCCCATTC 8054 Query 116039 -CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCT 116097 | |||| || | || | | |||||| ||||||||||| ||||| | || || Sbjct 8053 CCACAGTTCAG--AAGGCTTGACGTTCCACATGTCAAACTGGAGAATACCCTCCGAGGCA 7996 Query 116098 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG 116157 || ||||| ||||| || ||| || |||| ||| || | || | ||| Sbjct 7995 GGTGATCCTTCAAAGGTGGAATAAGGACCCTGCTCCTTGGCAAGCTCCATGGACGCAGTC 7936 Query 116158 AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAA 116217 | || ||||| || | ||||| ||||| | |||| | |||||| || Sbjct 7935 AAGGAGGCGTGGTAGACGGTCTCGAAAATCTGCTTGTTCAACTCACGAGCCTCGGGTGAC 7876 Query 116218 TCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 116277 ||||| | |||||| | || | || || ||||| || ||||||| || || Sbjct 7875 TCAAAGGGCAGACGGAGAGCGAGGAAGGCGTCGGCAAGACCCTGAACACCGACACCGATG 7816 Query 116278 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATA 116337 || | || | ||| || || ||||| || |||||| ||| || ||||| Sbjct 7815 GGTCTGTGGCGCATGTTGCTGTTGCGAGCCTCCTGCACGGGGTAATGGTTGACGTCGATG 7756 Query 116338 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 116397 | | | ||||| || | || |||| || | ||||| ||||| | | ||| | Sbjct 7755 ATCTTGTTTAGGTTGCGGACCACGACCTGAGTCACGTCATGCAGCTTCTGAAAGTCATA- 7697 Query 116398 CTGCGAGTCTCTTCATTG---ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 116454 |||| ||| | | | ||| | ||||||||||| || || || || || || Sbjct 7696 --TCGAGCCTCGTTGTAGTCAACAAAGGCAGGAAGGGCGAGCGAAGCAAGGTTGCAGACG 7639 Query 116455 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 116514 | ||| ||| | | ||| || ||||| ||||| || | ||| ||||| | ||| Sbjct 7638 GCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAGAGATTAGAACTTCTGATG 7579 Query 116515 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGC 116574 || || | |||||| || || ||| |||| || ||||||||||||||||| | || Sbjct 7578 GTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGG 7519 Query 116575 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGT 116633 | || ||||| || || | | | ||| | | ||| | | || | ||| | | | Sbjct 7518 TTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGAGCTTCTG-GGCGCGGA---T 7463 Query 116634 GGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTC 116687 || ||| || |||| |||| |||||||||| ||| || ||||||||||| || Sbjct 7462 GGTCTTG---CGACCCTTGCCCTCACGCTCGTACTTTTCGTACAGAGCCTCAAACTCCTC 7406 Query 116688 ACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCAC 116746 | ||| ||| || | || || || || || ||||| | ||||| ||| | || Sbjct 7405 A-CCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACATGAGAGTCCAGTCGCCGT 7347 Query 116747 CCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGAC 116806 || ||| || |||||||||||||| || |||||||| || || ||| || ||||| Sbjct 7346 TCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGGCGAGGAAAAGGTCCCGCG 7287 Query 116807 AGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGT 116866 |||| | || || | || || || ||| | || | || || | || ||| |||| Sbjct 7286 CGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAACTCAAAGACATCAGCGT 7227 Query 116867 GCCACGGTTCCAGGTACACCGCGATTGACCCCTTG-CG---ACGACCAGCCTGGTTTACA 116922 |||| || |||||||| | || | | | ||| | || ||| |||||| |||| Sbjct 7226 GCCAAGGCTCCAGGTAGATGGC-AAAGGCACCTGGTCGCTTGTTGCCACCCTGGTCTACA 7168 Query 116923 TACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTT 116982 || || ||||| ||| || || || ||||| ||||||| |||| || || || Sbjct 7167 TATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGCCATTGGAAGTACCGTTG 7108 Query 116983 GTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCC 117040 || || || || ||| | |||| | || ||||| || | ||||| || | Sbjct 7107 GTGCCAGCAATGTATGAGCC--AGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCGC 7050 Query 117041 CTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGT 117100 | ||| || ||||| ||||| | |||| || | ||||| || ||||| || Sbjct 7049 CAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCGATGCTGT 6990 Query 117101 CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTG 117159 || |||| | ||| |||||||||| |||| || ||||| || |||||||| ||| Sbjct 6989 CATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTG-GGCCTGGGGAGTACCAGCATTG 6931 Query 117160 AAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCA 117217 || ||||| || | |||||| ||| | | |||| |||||| | ||| || || | Sbjct 6930 AAAAGGGTCGGAGAGGCGTGGGTGA--AGAACTTGCTGGACATGAGGTTGTACGTTTCAA 6873 Query 117218 AGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGG 117277 ||| ||||| || || || |||| | ||| ||||||| ||| | |||| Sbjct 6872 TGACGCGCTCAATGTTGTCGCCCCAGATGCCGACAGCGACACGCATAATCATATGCTGGG 6813 Query 117278 GTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGAC 117337 || || | | | || | |||| || ||||||| ||||| ||||||| | Sbjct 6812 GTCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTACGATCGCTCCAGAGTCTTGAAGC 6753 Query 117338 CAAAATA 117344 |||| || Sbjct 6752 CAAAGTA 6746 >seq1923 Length=107003 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| ||||||||||| || ||||||||||| || |||||| ||| || Sbjct 7758 GCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGTTCGTTAGAGAAGGTCAGGCCG 7817 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| | ||||||||||||| ||| || || | ||| | ||| ||||||||| Sbjct 7818 GGCATCAAGCCCCGCTTCTTCAGCCAAAAGATGGAGGCAAAGGCGCCGCTGAAGAAGATG 7877 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAG 127678 ||||| ||| || || || | || |||| ||| ||| Sbjct 7878 CCCTCAACAGCGGCAAAGGCGACTAATCGCTGGGCGAAG 7916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613491601579440