Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 277 2e-69
seq1923 98.7 1e-15
>seq1793
Length=11804
Score = 277 bits (306), Expect = 2e-69
Identities = 1159/1807 (64%), Gaps = 47/1807 (3%)
Strand=Plus/Minus
Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622
||||||||| ||||||||||| ||| |||||||| | | ||||| |||| | ||
Sbjct 8530 GTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATCGAGGTGATTTT 8471
Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 115682
| | || || || |||| || ||||| || || || || |||||| ||
Sbjct 8470 GCCCATCGTGGGGTCTTTCATGTGGATGTTCAGCGACTGCGACTGGTCAATGAAGGCGCC 8411
Query 115683 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAG 115742
|| || || ||||| | || || | | | || ||||| || || |||||||
Sbjct 8410 GCGGTCGGCGGCCATCTGAACAACCTGACGCTGCGAAATCTCCCAAACGGTCTTGTAGAG 8351
Query 115743 GTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCAT 115802
||| || || | ||||| | || |||||||| || || || | | ||
Sbjct 8350 CGCCTTGATGTCGGCAGGGATGTTGGGAATGTTTTGGATGGATCCGTT---CTCGGCAAT 8294
Query 115803 GA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTG 115859
|| | | |||||| | | ||||| ||||| || | || |||| | |||
Sbjct 8293 GATGCGGTTCTTCATGGCATCGGACCACAGACCCATGTCGACCAGGTCCTTGAGGAGCCA 8234
Query 115860 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTA 115919
| || || || ||||| || || | | || | | | |||||||||| ||||||
Sbjct 8233 CGGGTTCACGACCTGGAACTCCCCAGCCAAGACACGGCGCTGGTAGATGTTGGACGTGTA 8174
Query 115920 TGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGC 115979
|||||| || ||||||||||| || | ||| || | || ||||| ||||||||||| ||
Sbjct 8173 TGGCTCGAAACACTCATTGTTGCCGAGGATCTGAGAGGTCGAGGCCGTGGGCATGGGAGC 8114
Query 115980 CATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGT- 116038
| | | | |||||||| ||| | || | || | ||||| || |||||| |
Sbjct 8113 AAGCAACAAGGAGTTGCGGATACCATGCTCCTTGATTTGCTCCTTCAGATTGTCCCATTC 8054
Query 116039 -CGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCT 116097
| |||| || | || | | |||||| ||||||||||| ||||| | || ||
Sbjct 8053 CCACAGTTCAG--AAGGCTTGACGTTCCACATGTCAAACTGGAGAATACCCTCCGAGGCA 7996
Query 116098 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG 116157
|| ||||| ||||| || ||| || |||| ||| || | || | |||
Sbjct 7995 GGTGATCCTTCAAAGGTGGAATAAGGACCCTGCTCCTTGGCAAGCTCCATGGACGCAGTC 7936
Query 116158 AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAA 116217
| || ||||| || | ||||| ||||| | |||| | |||||| ||
Sbjct 7935 AAGGAGGCGTGGTAGACGGTCTCGAAAATCTGCTTGTTCAACTCACGAGCCTCGGGTGAC 7876
Query 116218 TCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATT 116277
||||| | |||||| | || | || || ||||| || ||||||| || ||
Sbjct 7875 TCAAAGGGCAGACGGAGAGCGAGGAAGGCGTCGGCAAGACCCTGAACACCGACACCGATG 7816
Query 116278 GGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATA 116337
|| | || | ||| || || ||||| || |||||| ||| || |||||
Sbjct 7815 GGTCTGTGGCGCATGTTGCTGTTGCGAGCCTCCTGCACGGGGTAATGGTTGACGTCGATG 7756
Query 116338 ACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA 116397
| | | ||||| || | || |||| || | ||||| ||||| | | ||| |
Sbjct 7755 ATCTTGTTTAGGTTGCGGACCACGACCTGAGTCACGTCATGCAGCTTCTGAAAGTCATA- 7697
Query 116398 CTGCGAGTCTCTTCATTG---ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACA 116454
|||| ||| | | | ||| | ||||||||||| || || || || || ||
Sbjct 7696 --TCGAGCCTCGTTGTAGTCAACAAAGGCAGGAAGGGCGAGCGAAGCAAGGTTGCAGACG 7639
Query 116455 GAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATG 116514
| ||| ||| | | ||| || ||||| ||||| || | ||| ||||| | |||
Sbjct 7638 GCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAGAGATTAGAACTTCTGATG 7579
Query 116515 GTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGC 116574
|| || | |||||| || || ||| |||| || ||||||||||||||||| | ||
Sbjct 7578 GTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGG 7519
Query 116575 GTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGT 116633
| || ||||| || || | | | ||| | | ||| | | || | ||| | | |
Sbjct 7518 TTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGAGCTTCTG-GGCGCGGA---T 7463
Query 116634 GGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTC 116687
|| ||| || |||| |||| |||||||||| ||| || ||||||||||| ||
Sbjct 7462 GGTCTTG---CGACCCTTGCCCTCACGCTCGTACTTTTCGTACAGAGCCTCAAACTCCTC 7406
Query 116688 ACCCACAGC-CTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCAC 116746
| ||| ||| || | || || || || || ||||| | ||||| ||| | ||
Sbjct 7405 A-CCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACATGAGAGTCCAGTCGCCGT 7347
Query 116747 CCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGAC 116806
|| ||| || |||||||||||||| || |||||||| || || ||| || |||||
Sbjct 7346 TCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGGCGAGGAAAAGGTCCCGCG 7287
Query 116807 AGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGT 116866
|||| | || || | || || || ||| | || | || || | || ||| ||||
Sbjct 7286 CGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAACTCAAAGACATCAGCGT 7227
Query 116867 GCCACGGTTCCAGGTACACCGCGATTGACCCCTTG-CG---ACGACCAGCCTGGTTTACA 116922
|||| || |||||||| | || | | | ||| | || ||| |||||| ||||
Sbjct 7226 GCCAAGGCTCCAGGTAGATGGC-AAAGGCACCTGGTCGCTTGTTGCCACCCTGGTCTACA 7168
Query 116923 TACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTT 116982
|| || ||||| ||| || || || ||||| ||||||| |||| || || ||
Sbjct 7167 TATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGCCATTGGAAGTACCGTTG 7108
Query 116983 GTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCC 117040
|| || || || ||| | |||| | || ||||| || | ||||| || |
Sbjct 7107 GTGCCAGCAATGTATGAGCC--AGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCGC 7050
Query 117041 CTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGT 117100
| ||| || ||||| ||||| | |||| || | ||||| || ||||| ||
Sbjct 7049 CAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCGATGCTGT 6990
Query 117101 CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTG 117159
|| |||| | ||| |||||||||| |||| || ||||| || |||||||| |||
Sbjct 6989 CATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTG-GGCCTGGGGAGTACCAGCATTG 6931
Query 117160 AAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCA 117217
|| ||||| || | |||||| ||| | | |||| |||||| | ||| || || |
Sbjct 6930 AAAAGGGTCGGAGAGGCGTGGGTGA--AGAACTTGCTGGACATGAGGTTGTACGTTTCAA 6873
Query 117218 AGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGG 117277
||| ||||| || || || |||| | ||| ||||||| ||| | ||||
Sbjct 6872 TGACGCGCTCAATGTTGTCGCCCCAGATGCCGACAGCGACACGCATAATCATATGCTGGG 6813
Query 117278 GTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGAC 117337
|| || | | | || | |||| || ||||||| ||||| ||||||| |
Sbjct 6812 GTCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTACGATCGCTCCAGAGTCTTGAAGC 6753
Query 117338 CAAAATA 117344
|||| ||
Sbjct 6752 CAAAGTA 6746
>seq1923
Length=107003
Score = 98.7 bits (108), Expect = 1e-15
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| ||||||||||| || ||||||||||| || |||||| ||| ||
Sbjct 7758 GCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGTTCGTTAGAGAAGGTCAGGCCG 7817
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||| | ||||||||||||| ||| || || | ||| | ||| |||||||||
Sbjct 7818 GGCATCAAGCCCCGCTTCTTCAGCCAAAAGATGGAGGCAAAGGCGCCGCTGAAGAAGATG 7877
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAG 127678
||||| ||| || || || | || |||| ||| |||
Sbjct 7878 CCCTCAACAGCGGCAAAGGCGACTAATCGCTGGGCGAAG 7916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613491601579440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |