Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1793 138 2e-27 >seq1793 Length=11804 Score = 138 bits (152), Expect = 2e-27 Identities = 335/494 (68%), Gaps = 10/494 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATG 203896 || ||| || |||||||| || |||| |||||| ||||| | | || ||||||||| Sbjct 8578 CTGGTCGACGGTGAACTGGATCGGCGCGG-CGGCAG-CCTGCGTGCGCAAGTAGTACATG 8521 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 || ||||| || ||| || ||| ||| | |||||| || | | ||||| || || Sbjct 8520 CCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATCGAGGTGATTTTGCCCATCGTG 8461 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015 ||||| |||||| |||||||| ||||| ||||| ||| |||||||| || || || Sbjct 8460 GGGTCTTTCATGTGGATGTTCAGCGACTGCGACTGGTCAATG-AAGGCGCCGCGGTCGGC 8402 Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGG 204074 |||||| | | || ||||||||||||||| || |||||| | | || || || Sbjct 8401 GGCCATCTGAACAACCTGACGCTGCGAAATCTCCCAAACGGTCTTGTAGAGCGCCT-TGA 8343 Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 ||| ||| | | | | || | ||| || ||||| ||||| || | | || Sbjct 8342 TGTCGGCAGGGATGT-TGGGAATGTTTTGGATGGATCCGTTCTCGGCAATGATGCGGTTC 8284 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | || ||||| |||| || ||| ||| | || ||||| | | Sbjct 8283 TTCATGGCATCGGACCACAGACCCATGTCGACCAGGTCCTTGAGGAGCCACGGGTTCACG 8224 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || || | || || | || | | | |||| ||| |||| ||||| Sbjct 8223 ACCTGGAACTCCCCAGCCAAGACACGGCGCTGGTAGATGTTGGACGTGTATGGCTCGAAA 8164 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||| |||||||||| ||||||| ||| |||||||||||||||||| || | || | Sbjct 8163 CACTCATTGTTGCCGAGGATCTGAGAGGTCGAGGCCGTGGGCATGGGAGCAAGCAACAAG 8104 Query 204314 GAGTTGCGCACACC 204327 |||||||| | ||| Sbjct 8103 GAGTTGCGGATACC 8090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795134983179040