Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 138 2e-27
>seq1793
Length=11804
Score = 138 bits (152), Expect = 2e-27
Identities = 335/494 (68%), Gaps = 10/494 (2%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATG 203896
|| ||| || |||||||| || |||| |||||| ||||| | | || |||||||||
Sbjct 8578 CTGGTCGACGGTGAACTGGATCGGCGCGG-CGGCAG-CCTGCGTGCGCAAGTAGTACATG 8521
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|| ||||| || ||| || ||| ||| | |||||| || | | ||||| || ||
Sbjct 8520 CCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATCGAGGTGATTTTGCCCATCGTG 8461
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGC 204015
||||| |||||| |||||||| ||||| ||||| ||| |||||||| || || ||
Sbjct 8460 GGGTCTTTCATGTGGATGTTCAGCGACTGCGACTGGTCAATG-AAGGCGCCGCGGTCGGC 8402
Query 204016 GGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGG 204074
|||||| | | || ||||||||||||||| || |||||| | | || || ||
Sbjct 8401 GGCCATCTGAACAACCTGACGCTGCGAAATCTCCCAAACGGTCTTGTAGAGCGCCT-TGA 8343
Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133
||| ||| | | | | || | ||| || ||||| ||||| || | | ||
Sbjct 8342 TGTCGGCAGGGATGT-TGGGAATGTTTTGGATGGATCCGTTCTCGGCAATGATGCGGTTC 8284
Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| | | || ||||| |||| || ||| ||| | || ||||| | |
Sbjct 8283 TTCATGGCATCGGACCACAGACCCATGTCGACCAGGTCCTTGAGGAGCCACGGGTTCACG 8224
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| ||| || || || | || || | || | | | |||| ||| |||| |||||
Sbjct 8223 ACCTGGAACTCCCCAGCCAAGACACGGCGCTGGTAGATGTTGGACGTGTATGGCTCGAAA 8164
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
||| |||||||||| ||||||| ||| |||||||||||||||||| || | || |
Sbjct 8163 CACTCATTGTTGCCGAGGATCTGAGAGGTCGAGGCCGTGGGCATGGGAGCAAGCAACAAG 8104
Query 204314 GAGTTGCGCACACC 204327
|||||||| | |||
Sbjct 8103 GAGTTGCGGATACC 8090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795134983179040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |