Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 125 8e-24
seq1479 123 3e-23
>seq1893
Length=9943
Score = 125 bits (138), Expect = 8e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| || | | ||||| || ||||||| ||| ||||| ||||| ||||||||||
Sbjct 804 TGCCACCCCGAAGACGCAGGACGAGATGCAGCGTAGATTCCTTCTGGATGTTGTAGTCGG 745
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| ||||| || | || ||||| |||||||| ||||| |||| ||||||||||| | |
Sbjct 744 ACAGAGTACGGCCATCTTCGAGTTGCTTGCCAGCGAAAATCAGTCGCTGCTGGTCCGGAG 685
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544
| | || |||||||||| ||||| ||||| | | | |||||| || || |
Sbjct 684 GGATGCCCTCCTTGTCCTGAATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGA 625
Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
| || | |||||||| ||||| || || || || || || || |||||
Sbjct 624 CCTCAAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACGAAAATCTGCAT 576
Score = 111 bits (122), Expect = 2e-19
Identities = 157/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424
|||| |||| | ||||||||||| ||| | ||| |||||||| || ||||||||||
Sbjct 1107 TGCCACCTCGGAGACGCAACACCAAATGAAGTGTTGATTCCTTTTGAATGTTGTAGTCGG 1048
Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484
| || |||||| | || || || |||||||| ||||| |||| || |||||||| | |
Sbjct 1047 AGAGGGTGCGCCCATCTTCAAGTTGCTTGCCAGCGAAAATCAGACGTTGCTGGTCCGGAG 988
Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 46543
| | | ||||| ||| ||||| ||||| ||| | | | |||||| || ||
Sbjct 987 GGATCCCTTCCTTATCCTGAATCTTTGACTTGA-CGTTGTCAATAGTGTCGGAGGACTCA 929
Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
|| || | || ||||| ||||| ||||| || || ||
Sbjct 928 ACCTCGAGGGTAATGGTCTTGCCAGTCAGGGTCTTGAC 891
>seq1479
Length=130260
Score = 123 bits (136), Expect = 3e-23
Identities = 136/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||||||||||||||||||||| || || || | || ||||| |||||||||||||| |
Sbjct 49445 CCTTTTGGATATTGTAGTCGGACAGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCGAAAA 49504
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
|||| ||||||||||| | || | | |||||||||| ||| || ||||| |
Sbjct 49505 TCAATCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATTTTAGACTTGACATTGT 49564
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||||| || || || || | ||||||||||| ||||||||||| || || |
Sbjct 49565 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTTTTACCCGTCAGCGTCTTCACGA 49624
Query 46584 A 46584
|
Sbjct 49625 A 49625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565224028813680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |