Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 116 1e-20
seq1479 98.7 4e-15
>seq1893
Length=9943
Score = 116 bits (128), Expect = 1e-20
Identities = 147/202 (73%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119
|||| || || |||||||| || || ||||| || || ||||| || || || | ||||
Sbjct 889 TCGTCAAGACCCTGACTGGCAAGACCATTACCCTCGAGGTTGAGTCCTCCGACACTATTG 948
Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179
| | || ||| ||||| ||||||||||| || ||||| || || |||||| | |
Sbjct 949 ACAACGTCAAGTCAAAGATTCAGGATAAGGAAGGGATCCCTCCGGACCAGCAACGTCTGA 1008
Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239
||||| | || || |||||||||||||| | || | | || || || ||| | ||||
Sbjct 1009 TTTTCGCTGGCAAGCAACTTGAAGATGGGCGCACCCTCTCCGACTACAACATTCAAAAGG 1068
Query 391240 ATGCAACACTTCACTTAGTATT 391261
| |||||||||| || || ||
Sbjct 1069 AATCAACACTTCATTTGGTGTT 1090
Score = 96.9 bits (106), Expect = 1e-14
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| || ||||| |||| || || || ||||| | || || ||||| |
Sbjct 1107 ATGCAAATTTTTGTCAAAACCTTGACAGGCAAGACAATTACCTTGGAGGTGGAATCCAGT 1166
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||||| | || |||||||||||||||||||| |||||||| |||||
Sbjct 1167 GATACTATTGACAACGTCAAGTCTAAAATTCAAGATAAGGAAGGTATTCCTCCGGATCAG 1226
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||| | ||||| | || || || | |||||||| | ||| || ||||| ||
Sbjct 1227 CAACGTCTCATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACTCTGAGCGATTACAAC 1286
Query 391230 ATTGATAAGGA 391240
|| | |||||
Sbjct 1287 ATCCAGAAGGA 1297
>seq1479
Length=130260
Score = 98.7 bits (108), Expect = 4e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 391058 TTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACAT 391117
|||||| || || ||||| |||||||| || || || || || || || ||||| | |||
Sbjct 49626 TTTCGTGAAGACGCTGACGGGTAAAACCATCACCCTCGAGGTCGAGTCCTCTGACACCAT 49567
Query 391118 TGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTT 391177
|| | | || ||||| || || ||||| || ||||||||||| || || || ||
Sbjct 49566 CGACAATGTCAAGTCTAAAATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGATT 49507
Query 391178 AATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAA 391237
|||||| | || || ||||| || ||||| |||| || | || || ||||| | ||
Sbjct 49506 GATTTTCGCCGGCAAGCAACTCGAGGATGGCCGAACCCTGTCCGACTACAATATCCAAAA 49447
Query 391238 GG 391239
||
Sbjct 49446 GG 49445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975666911543672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |