Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq188 89.7 4e-12 >seq188 Length=45544 Score = 89.7 bits (98), Expect = 4e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 || || |||||||| |||| ||||||||| || || ||||||| || | |||||||||| Sbjct 5530 TTCTCCAGACCATATGCAAGAGCAGCAGCCGTAGGCTCATTAACAACACGCAAAACATTA 5471 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 ||||| || || || ||||| || ||| || | ||| | || || || || ||| Sbjct 5470 AGACCGGCGATCTGGCCCGCATCCTTGGTGCTCTGACGTTGAGCGTCATTGAAGTAGGCA 5411 Query 518288 GGAACAGTAATAACGGC 518304 ||||| || | |||||| Sbjct 5410 GGAACGGTGACAACGGC 5394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780721466220004