Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1693 399 3e-106 seq1551 145 1e-29 >seq1693 Length=13545 Score = 399 bits (442), Expect = 3e-106 Identities = 1048/1584 (66%), Gaps = 19/1584 (1%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGAC--CATCTTTTCAATGTCTTCTTTCG 6626 ||||| || || || ||||| || || || |||| ||| ||||| ||||| || | Sbjct 8169 TCATCCTCCTCCTTGTACTTCTCGGCGTC--GGACAACATGCGCTCAATATCTTCCTTGG 8112 Query 6627 ATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686 | || | ||||| || || || || |||||| | ||| || || | | |||| || Sbjct 8111 ACAAACGACCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTGCCGGTGCCCTTCTCCA 8052 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 | ||| ||||||| ||||| || ||||||| ||||| | || | |||||| || Sbjct 8051 CGGCAGACACATTCATGATACCGTTGGCATCAAGGTCGAAGGTAACCTCAATTTGAGGGA 7992 Query 6747 TACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCG 6806 ||| | || || | || ||||| || | || || | || | | |||| ||| Sbjct 7991 CACCGCGGGGAGCAGGGGGGATACCAGTGAGCTCGAACTTGCCCATGAGGTTGTTGTCCT 7932 Query 6807 TCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTG 6866 | | ||||| | ||||| ||||| || | || ||| |||| || || || Sbjct 7931 TGGTCTTCTGTCTCTCACCCTCATACACCTGGATGAGCACACCAGGCTGGTTGTCGGAGA 7872 Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926 || ||||||| || ||||| | ||||| || |||||||| || || | | || Sbjct 7871 AGGTGGAGAAGACTTCAGACTTCTTGGTGGGAATGGTGGTATTTCTAGGGATCAACTTGG 7812 Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986 |||| |||||||| ||| || | || || || ||||| | || || | || | | Sbjct 7811 TCATCATACCACCGGCAGTCTCAATACCGAGCGAAAGAGGCGCGACATCAAGCAGCAGGA 7752 Query 6987 GGTCTTGAACAGATTCGT-TCCCTTCAC-CCGTTAAGA-TGGCGGCTTGGACCGTCGCCC 7043 || | |||| | | | | ||| |||| |||| ||||| || | || | Sbjct 7751 TTTCATTGGTGGATTTGGATGAAGTGTCGCCGGAAAGAATGGCAGCTTGAACAGCGGCAC 7692 Query 7044 CGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAAT 7103 |||| || || |||||||||||||| || | || || |||| || ||||| || || | Sbjct 7691 CGTAGGCAACAGCCTCATCGGGGTTGATGCTCTTGTTGGGTTCCTTGCCGTTGAAGTAGT 7632 Query 7104 CCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCAT 7163 | | | | | |||||| || || || || || ||||||||||| || || || | Sbjct 7631 CGGTGATGAGCTTCTGAATTCGGGGAATGCGGGTGGAACCACCGACCAAGACAATCTCGT 7572 Query 7164 TCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATT 7223 ||||| || || ||||| | || ||| |||||||| | ||| Sbjct 7571 GCACTTGGCTCTTGTCAATCTTAGCATCGGCAAGGACGCGGTCGACAGGCTGGATAGTAG 7512 Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283 |||||||||||| || || ||||||||||| || ||||| ||||| || || || | Sbjct 7511 AGCGGAACAAGTCCTGGCAGAGCTCCTCAAAACGAGCTCGGGTGATGGAGGTGTAAAAGT 7452 Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTC 7343 | | ||| || | | || ||||| ||||||| || || || | ||||| | || | Sbjct 7451 CGATGCCCTCAAAGAGAGAGTCAATCTCAATGGAGGTCTGCGCTGAGGAAGAGAGGGTAC 7392 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403 |||| || ||||| || || ||||| | |||||| || || || ||| | | | Sbjct 7391 GCTTGGCACGCTCGCAGGCGGTTCGGAGACGACGCAGAGCGCGACTGTTTGTGCTCAGGT 7332 Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463 ||||||| | || | |||||||| | |||||| | || | || || | Sbjct 7331 CTTTCTTGTTCTTTCTCTTAAACTCATTGACGAAGTGATTGACCAGACGGTTGTCAAAGT 7272 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 |||||||||||||||| || || || || || | ||||||||||||||||| |||| | Sbjct 7271 CTTCACCACCCAAGTGAGTGTCACCGGCAGTTGACTTGACTTCAAAGATACCCTCTTCGA 7212 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTA 7582 | | | | || ||||| || ||||| || || || ||||| ||||| || || ||| Sbjct 7211 TTGTAAGGAGGGACACATCGAAAGTACCGCCGCCGAGATCAAAGATGAGAACATTGCGT- 7153 Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642 || | || ||||| || |||||||| || || || || || || ||||| || || Sbjct 7152 TCACCCTCGACCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCGGTGGGTTCGTTGATG 7093 Query 7643 ATACGAAGACAGTTCAGGCCAGCAAT-AGTTGCC-GCATCTTTCGTCGCTTGTCGTTGCG 7700 ||||| || ||| || ||||| || || ||| |||||||| || ||||| ||||| | Sbjct 7092 ATACGCAGCACGTTGAGACCAGCGATCAG--GCCAGCATCTTTGGTGGCTTGACGTTGTG 7035 Query 7701 AATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACG 7760 | ||||| ||||| || || || || | ||| || | |||| | |||||||| Sbjct 7034 AGTCGTTGAAGTATGCAGGCACAGTGATGACGGCATTGTTGACGGTGCCCCCGAGATAAC 6975 Query 7761 ATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACT 7820 || || | || ||| ||||| |||| ||| ||||||||||| || | | || | Sbjct 6974 TCTCGGCAGTCTCGCGCATCTTGGTGAGAATCATTGATGAAATCTCCTCGGGAGTGAAAT 6915 Query 7821 GTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAA 7880 ||| | || || || || ||||| || | | || || ||| || | ||| | Sbjct 6914 TCTTCTTGTCGCCTTTGAACTCAACCTCGACTACAGGCTT-GCCG--GCCTTGTCGATGA 6858 Query 7881 CCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGA 7940 ||| | | | | ||||| || | || |||| ||| | ||||| | || | Sbjct 6857 TCTTGAAGGGGAAGTGCTTCATGTCAGCCTGCACCTCAGCGTCTGCGAACTTGCGGCCAA 6798 Query 7941 TAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCG 8000 | | ||||| || || || || ||||| | |||||||||||| ||| ||||| || | Sbjct 6797 TCAATCGCTTGGCGTCGAAGACGGTGTTGTGGGGGTTCATGGCGACTTGATTCTTGGCGG 6738 Query 8001 CGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT 8060 | || || || ||||| || || || || || || ||| |||||||||||||||| | Sbjct 6737 CATCGCCAATGAGACGCTCGGTA---TCAGTGAAGGCAACGAACGATGGGGTCGTTCGGT 6681 Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120 | || ||||| || || || || || ||||| | | ||| || || || || | Sbjct 6680 TACCCTGGTCATTGGCGATGATGTCGCATCGGTCCTCGCGGAAGATACCCACACATGAGT 6621 Query 8121 ACGTTGTTCCTAAATCAATACCGA 8144 | || || || || ||||| |||| Sbjct 6620 ATGTGGTACCCAAGTCAATTCCGA 6597 >seq1551 Length=17057 Score = 145 bits (160), Expect = 1e-29 Identities = 337/500 (67%), Gaps = 15/500 (3%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGG--ATGTATAGAAATCAACGCCGTCGTATAACG 7301 || || |||||||| || |||||||||| ||| || || || |||| || | | || Sbjct 3122 AGATCTTCAAAACGAGCCCGGGTAATGGTCATGG-TA-AAGTCCTCGCCATCAAACAGCG 3179 Query 7302 AATCAATTTCAATGGTTGTTTGTGC--CG-TCGA-AGATAACGTTCGCTTTGCGCGCTCA 7357 | ||||| ||||| || | || || || |||| ||| || ||||| ||||||||| Sbjct 3180 AGTCAATCTCAATCGTGGCCTGAGCACCGCTCGACAGA----GTGCGCTTGGCGCGCTCA 3235 Query 7358 CACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTA 7417 || || || || | | ||||| ||||| | | ||| ||||| ||||| || Sbjct 3236 CAAGCAGTGCGGAGTCTTCGAAGCGCACGGGCATCGCCGCTGATATCCTTCTTGGACTTG 3295 Query 7418 CGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAG 7477 || | || || | | |||| |||||| | | || || || | ||||| | Sbjct 3296 CGACTGAATTCCTTCTTGCAGTGATCAAGGAGGTTGGTGTCAAAGTCCTGCCCACCAAGA 3355 Query 7478 TGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAA 7537 || || || |||||||| || |||||| |||| || || | ||||| | | || Sbjct 3356 TGGGTGTCGCCCGCGGTGGCCTTGACTGTGAAGACGCCACCCTGGATGTTGAGGAGAGAG 3415 Query 7538 ACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTC 7597 |||||||| ||||| || |||||||| | ||||| ||||| || | |||| | || Sbjct 3416 ACATCAAAGGTACCGCCGCCCAGGTCGTAGATGAGGACGTTACGCTCCTTGTCTGTCTTG 3475 Query 7598 TTA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 | | |||||||| || ||||| || || || || || || || || || ||| | Sbjct 3476 CCAGAGCCCAGACCGTAGGCAATAGCGGCAGCAGTAGGCTCGTTGATGATGCGGAGAACG 3535 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || ||||| || || | | || || || || ||||| || || ||||| |||||| Sbjct 3536 TTGAGGCCGGCGATGGCACCAGCGTCCTTGGTGGCTTGGCGCTGGTTGTCGTTGAAGTAG 3595 Query 7715 GCCGGGACCGTTACGACCGC 7734 || || ||||| ||||| || Sbjct 3596 GCGGGCACCGTGACGACGGC 3615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635116651748560