Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1793 203 4e-47 seq1259 84.2 3e-11 >seq1793 Length=11804 Score = 203 bits (224), Expect = 4e-47 Identities = 1107/1746 (63%), Gaps = 57/1746 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| | ||| | ||||| ||||| |||| ||| || || | ||||| || Sbjct 6812 CCCCAGCATATGATTATGCGTGTCGCTGTCGGCATCTGGGGCGACAACATTGAGCGCGTC 6871 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | || || ||| || |||||| | | |||| |||||| | || ||||| ||| Sbjct 6872 ATTGAAACGTACAACCTCATGTCCAGCAAGTTCTTCACCCACGCCTCTCCGACCCTTTTC 6931 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 || |||||||| || |||| |||| || ||||| | | | ||||| || Sbjct 6932 AATGCTGGTACTCCCCAGGCCCAGCTGTCATCCTGCTTCCTCGTCGACATGAAGGATGAC 6991 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 ||| | ||||| || | ||| |||| || ||| ||||| || |||||| Sbjct 6992 AGCATCGAGGGCATCTATGACACGCTCAAGACCTGCGCCATGATCTCCAAAATGGCTGGC 7051 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAA 111909 || || || | || |||| || | |||| | ||| || || || || | Sbjct 7052 GGCATTGGCCTCAACGTCCACCGCATCCGTGCCACT--GGCTCATACATTGCTGGCACCA 7109 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | ||| || |||| | ||||| ||||| || || || ||| ||| || | |||| Sbjct 7110 ACGGTACTTCCAATGGCGTCATTCCCATGCTCCGAGTGTTCAACAACACGGCCAGATATG 7169 Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 || |||| | ||| ||| | ||| || | || |||| || ||||| |||| Sbjct 7170 TAGACCAGGGTGGCAACAAGCGACC--AGGTGCCTTTGCCA-TCTACCTGGAGCCTTGGC 7226 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 |||| ||| || | |||||||| || | ||| ||||| || | ||||||| || Sbjct 7227 ACGCTGATGTCTTTGAGTTCCTCGACCTACGTAAGAACCACGGCAAGGAGGAGGTTCGCG 7286 Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 || || || ||| ||| || ||||| || ||||||||||||||| | || ||| ||| Sbjct 7287 CGCGGGACCTTTTCCTCGCCCTGTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGA 7346 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCGTGGGT 112202 ||| | ||| ||||| | ||||| | || ||||| || |||| ||| | ||| Sbjct 7347 ACGGCGACTGGACTCTCATGTGTCCCAATGAGTGCCCCGGCCTTGCCGACTGCTAT-GGT 7405 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAG---GAAG---AAAGTCGGGCGACTGCG 112256 ||||||||||| || || ||| |||||||||| || | | |||| ||| | Sbjct 7406 GAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGCGTGAGGGCAAGGGTCGCAAGAC--CA 7463 Query 112257 ACGGTG-CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 | | | |||| || | ||| | | ||| | | |||| || ||||| || | Sbjct 7464 TCCGCGCCCAGAAGC-----TCTGGTACTCCATTTTGGAAGCTCAGACTGAGACCGGCAA 7518 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 || | ||||| ||||| || || || ||| | ||||| || || ||||| | || Sbjct 7519 CCCCTTCATGCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTAGGAAC 7578 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 |||| ||||| || ||||| || || || | |||| | | | || ||| ||| Sbjct 7579 CATCAGAAGTTCTAATCTCTGCACGGAGATTATCGAATACTCCGCCCCGGACGAGGTGGC 7638 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACA 112493 || || ||||| || || |||| || || | ||| || | | | || | | | Sbjct 7639 CGTCTGCAACCTTGCTTCGCTCGCCCTTCCTGCCTTTGTTGA-CTACA-ACGAGGCTCGA 7696 Query 112494 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTT 112553 | ||| | | | || || || || || || | || |||||||||| | Sbjct 7697 TATGACTTTCAGAAGCTGCATGACGTGACTCAGGTCGTGGTCCGCAACCTAAACAAGATC 7756 Query 112554 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 112613 || || || ||||||||| || ||||| || || ||| | ||| | || Sbjct 7757 ATCGACGTCAACCATTACCCCGTGCAGGAGGCTCGCAACAGCAACATGCGCCACAGACCC 7816 Query 112614 ATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTT 112670 || ||| ||||||| || ||||| || || | ||| | ||| ||| | | ||| Sbjct 7817 ATCGGTGTCGGTGTTCAGGGTCTTGCCGACGCCTTCCTCGCTCTCCGTCTGC---CCTTT 7873 Query 112671 GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCT 112730 || || ||| || || | || || || || ||||| | || |||||| | Sbjct 7874 GAGTCACCCGAGGCTCGTGAGTTGAACAAGCAGATTTTCGAGACCGTCTACCACGCCTC- 7932 Query 112731 CTTGA-GGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 112789 ||||| ||| |||| | || ||| | ||||| ||| |||||||| || || Sbjct 7933 CTTGACTGCGTCCATGGAGCTTGCCAAGGAGCAGGGTCCTTATTCCACCTTTGAAGGATC 7992 Query 112790 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG-CTTC--- 112845 || || || | || | || || ||||| |||| |||| || |||| |||| Sbjct 7993 ACCTGCCTCGGAGGGTATTCTCCAGTTTGACATGT-GGAACGT-----CAAGCCTTCTGA 8046 Query 112846 AC--TACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 112903 || | || |||||| ||| ||||| | ||||||||| | ||| | || ||| | Sbjct 8047 ACTGTGGGAATGGGACAATCTGAAGGAGCAAATCAAGGAGCATGGTATCCGCAACTCCTT 8106 Query 112904 TTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 112963 ||| | || || ||||| || ||||| ||| | || ||| | || || ||||| || || Sbjct 8107 GTTGCTTGCTCCCATGCCCACGGCCTCGACCTCTCAGATCCTCGGCAACAATGAGTGTTT 8166 Query 112964 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 113023 || || |||||| | |||||||| | | | | | | || || ||||| | | || Sbjct 8167 CGAGCCATACACGTCCAACATCTACCAGCGCCGTGTCTTGGCTGGGGAGTTCCAGGTCGT 8226 Query 113024 CAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 113083 ||| | ||| | | ||||| || || ||||| |||||| | | |||||| | Sbjct 8227 GAACCCGTGGCTCCTCAAGGACCTGGTCGACATGGGTCTGTGGTCCGATGCCATGAAGAA 8286 Query 113084 TCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAA 113143 | ||| | | | || ||||| ||||| ||| | || || | || || || Sbjct 8287 CCGCATCATTGCCGAGAACGGATCCATCCAAAACATTCCCAACATCCCTGCCGACATCAA 8346 Query 113144 GAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGA 113203 | | | ||| || |||||||| || | | | || || | |||||||| || Sbjct 8347 GGCGCTCTACAAGACCGTTTGGGAGATTTCGCAGCGTCAGGTTGTTCAGATGGCCGCCGA 8406 Query 113204 TCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACG 113261 || || ||||||||| | |||| ||| |||| | |||| || || ||| Sbjct 8407 CCGCGGCGCCTTCATTGACC--AGTCGCAGTCGCTGAACATCCACATGAAAGACCCCACG 8464 Query 113262 ATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATG 113321 ||| ||| || | || |||||| | | | |||||| ||||||||| ||||| ||| Sbjct 8465 ATGGGCAAAATCACCTCGATGCACTTTGCCGGCTGGAAGCTGGGTCTCAAGACGGGCATG 8524 Query 113322 TATTAC 113327 || ||| Sbjct 8525 TACTAC 8530 >seq1259 Length=27818 Score = 84.2 bits (92), Expect = 3e-11 Identities = 179/262 (68%), Gaps = 8/262 (3%) Strand=Plus/Plus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 ||| || || || || ||||||| |||||| || ||||| ||| | | | || || Sbjct 2117 GGCGTCGATTTCGTCGATGAAGATGATGCAAGGGGCATTTTTGCGGCCTTCGGCGAACAG 2176 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182 ||| || || | | | ||| || ||||||||||| ||||| || | || || || Sbjct 2177 ATCGCGGACCCTCGAAGGGCCGACGCCAACAAACATTTCCACGAACTCTGAACCGCTCAC 2236 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 || | ||| || || || ||||| ||| |||| ||| | || |||||||| | Sbjct 2237 GCTGAA-GAACGGAACGCCGGACTCACCAGCAGTGGCCTTGGCAATGAGCGTCTTACCAG 2295 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC-ACTT--CCAAAGT 16299 |||| || ||||| |||| ||||| || || ||||||||||| | || |||| | Sbjct 2296 TACCCGGAGGGCCCGCAAGGATCGCACCGCGCGGGATCTTGGCGCCGAGTTTCTCAAACT 2355 Query 16300 ATCTCTCAGGTTGCTTAAGAAA 16321 |||| || ||||| ||||| Sbjct 2356 ---TCTCGGGCTGCTTGAGAAA 2374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620726617624480