Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1793 129 7e-25 >seq1793 Length=11804 Score = 129 bits (142), Expect = 7e-25 Identities = 849/1349 (63%), Gaps = 59/1349 (4%) Strand=Plus/Minus Query 109751 GGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGG 109810 |||||||||| | |||||| || |||||||||||||||||||| ||||| || | || | Sbjct 8192 GGTAGATGTTGGACGTGTATGGCTCGAAACACTCATTGTTGCCGAGGATCTGAGAGGTCG 8133 Query 109811 AAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCT 109870 | || |||||||||||||| | | | ||| |||| ||| | | ||| | ||| Sbjct 8132 AGGCCGTGGGCATGGGAGCAAGCAACAAGGAGTTGCGGATACCATGCTCCTTGATTTGCT 8073 Query 109871 CACGCATTGCGTCCCAATCATAACGACCACTAAATT---TAGTCTCACCATCCCACATAT 109927 | || |||||| || |||| | || || || | | |||||| | Sbjct 8072 CCTTCAGATTGTCCCATTC-------CCAC--AGTTCAGAAGGCTTGACGTTCCACATGT 8022 Query 109928 CTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAA 109987 | || || | |||||| | ||||| || || | || | || | |||| Sbjct 8021 CAAACTGGAGAATACCCTCCGAGGCAGGTGATCCTTCAAAGGTGGAATAAGGACCCTGCT 7962 Query 109988 CCTCGGCCAACTC---GGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATAT 110044 ||| ||| | ||| ||| | || || || | || || || | ||||| ||||| | Sbjct 7961 CCTTGGCAAGCTCCATGGACGCAG--TCAAG-GAGGCGTGGTAGACGGTCTCGAAAATCT 7905 Query 110045 GAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACAT 110104 | |||| |||| ||| | || ||||| |||| | | || | | Sbjct 7904 GCTTGTTCAACTCACGAGCCTCGGGTGACTCAAAGGGCAGACGGAGAGCGAGGAAGGCGT 7845 Query 110105 CCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAG 110164 | || |||||||||||||||| ||| ||||| | || |||||| | ||||| Sbjct 7844 CGGCAAGACCCTGAACACCGACACCGATGGGTCTGTGGCGCATGTTGCTGTTGCGAGCCT 7785 Query 110165 TTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCG 110224 | ||||||||| |||| |||||||| | || || || ||| || | Sbjct 7784 CCTGCACGGGGTAATGGTTGACGTCGATGATCTTGTTTAGGTTGCGGACCACGACCTGAG 7725 Query 110225 TGATTTCATGGAGTTTGTCGTAATCGAACGT--TTTC--GTCTCCTTATTG---ACATAT 110277 | | ||||| || || | ||| || | || | ||| || | | ||| | Sbjct 7724 TCACGTCATGCAGCTTCT-------GAAAGTCATATCGAGCCTCGTTGTAGTCAACAAAG 7672 Query 110278 TTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCC 110337 || || || | || ||||| ||||| || | |||||| | ||| |||||| Sbjct 7671 GCAGGAAGGGCGAGCGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCG 7612 Query 110338 AAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTG 110397 | ||| ||||| || | || ||||| | ||| || | ||||||||| || || Sbjct 7611 ATAATCTCCGTGCAGAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTC 7552 Query 110398 GAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGA 110457 |||||| |||||||| ||||||||| | ||| | || || || ||||| | | | | Sbjct 7551 TTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAA 7492 Query 110458 ATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTT--CCTC---C 110511 |||| | ||| | | || | |||| ||| || | |||| |||| |||| | Sbjct 7491 ATGGAGTACCAGAGCTTCTG-GGCGCGGA----TGGTCTTGCGA-CCCTTGCCCTCACGC 7438 Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCC 110571 |||||||| ||||| ||||||| |||| || || || | ||| || | Sbjct 7437 TCGTACTTTTCGTACAGAGCCTCAAACTCCTCACCATAGCAGTCGGCAAGGCCGGGGCAC 7378 Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631 | | |||||| | ||| | ||| | || || ||| || | ||||||||| || ||| Sbjct 7377 TCATTGGGACACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCA 7318 Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691 || ||||||| || ||||||||| || ||| |||| || | || ||||| Sbjct 7317 GGGATCCACAGGGCGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTA 7258 Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATG--- 110748 ||||| || | || || | || ||| | |||||| || || || |||| || | | Sbjct 7257 CGTAGGTCGAGGAACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCA 7198 Query 110749 ---GATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805 | || ||| | | || |||||| ||||| | || ||| ||||| || | | Sbjct 7197 CCTGGTCGCTT--GTTG-CCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGG 7141 Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865 ||||| ||||| | |||| ||| ||| || || || ||| || | ||||| Sbjct 7140 AGCATGGGAATGACGCCATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCA 7081 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTC 110924 || ||| ||||| | | ||||| || || ||| || || || || || Sbjct 7080 CGGATGCGGTGGACGTTGAGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTC 7021 Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984 | |||| || |||| || || || || || |||| || | | || ||||| || Sbjct 7020 T-TGAGCGTGTCATAGATGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGA 6962 Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 |||| ||| | | || || || |||||||| || || || | || || ||| || Sbjct 6961 TGACAGCTGGGCCTGGGGAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGA--AG 6904 Query 111045 ACCTTG--GGACATCTTGTTGTATGTGTC 111071 | |||| |||||| |||||| || || Sbjct 6903 AACTTGCTGGACATGAGGTTGTACGTTTC 6875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588961025285200