Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 129 7e-25
>seq1793
Length=11804
Score = 129 bits (142), Expect = 7e-25
Identities = 849/1349 (63%), Gaps = 59/1349 (4%)
Strand=Plus/Minus
Query 109751 GGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGG 109810
|||||||||| | |||||| || |||||||||||||||||||| ||||| || | || |
Sbjct 8192 GGTAGATGTTGGACGTGTATGGCTCGAAACACTCATTGTTGCCGAGGATCTGAGAGGTCG 8133
Query 109811 AAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCT 109870
| || |||||||||||||| | | | ||| |||| ||| | | ||| | |||
Sbjct 8132 AGGCCGTGGGCATGGGAGCAAGCAACAAGGAGTTGCGGATACCATGCTCCTTGATTTGCT 8073
Query 109871 CACGCATTGCGTCCCAATCATAACGACCACTAAATT---TAGTCTCACCATCCCACATAT 109927
| || |||||| || |||| | || || || | | |||||| |
Sbjct 8072 CCTTCAGATTGTCCCATTC-------CCAC--AGTTCAGAAGGCTTGACGTTCCACATGT 8022
Query 109928 CTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAA 109987
| || || | |||||| | ||||| || || | || | || | ||||
Sbjct 8021 CAAACTGGAGAATACCCTCCGAGGCAGGTGATCCTTCAAAGGTGGAATAAGGACCCTGCT 7962
Query 109988 CCTCGGCCAACTC---GGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATAT 110044
||| ||| | ||| ||| | || || || | || || || | ||||| ||||| |
Sbjct 7961 CCTTGGCAAGCTCCATGGACGCAG--TCAAG-GAGGCGTGGTAGACGGTCTCGAAAATCT 7905
Query 110045 GAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACAT 110104
| |||| |||| ||| | || ||||| |||| | | || | |
Sbjct 7904 GCTTGTTCAACTCACGAGCCTCGGGTGACTCAAAGGGCAGACGGAGAGCGAGGAAGGCGT 7845
Query 110105 CCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAG 110164
| || |||||||||||||||| ||| ||||| | || |||||| | |||||
Sbjct 7844 CGGCAAGACCCTGAACACCGACACCGATGGGTCTGTGGCGCATGTTGCTGTTGCGAGCCT 7785
Query 110165 TTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCG 110224
| ||||||||| |||| |||||||| | || || || ||| || |
Sbjct 7784 CCTGCACGGGGTAATGGTTGACGTCGATGATCTTGTTTAGGTTGCGGACCACGACCTGAG 7725
Query 110225 TGATTTCATGGAGTTTGTCGTAATCGAACGT--TTTC--GTCTCCTTATTG---ACATAT 110277
| | ||||| || || | ||| || | || | ||| || | | ||| |
Sbjct 7724 TCACGTCATGCAGCTTCT-------GAAAGTCATATCGAGCCTCGTTGTAGTCAACAAAG 7672
Query 110278 TTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCC 110337
|| || || | || ||||| ||||| || | |||||| | ||| ||||||
Sbjct 7671 GCAGGAAGGGCGAGCGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCG 7612
Query 110338 AAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTG 110397
| ||| ||||| || | || ||||| | ||| || | ||||||||| || ||
Sbjct 7611 ATAATCTCCGTGCAGAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTC 7552
Query 110398 GAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGA 110457
|||||| |||||||| ||||||||| | ||| | || || || ||||| | | | |
Sbjct 7551 TTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAA 7492
Query 110458 ATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTT--CCTC---C 110511
|||| | ||| | | || | |||| ||| || | |||| |||| |||| |
Sbjct 7491 ATGGAGTACCAGAGCTTCTG-GGCGCGGA----TGGTCTTGCGA-CCCTTGCCCTCACGC 7438
Query 110512 TCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCC 110571
|||||||| ||||| ||||||| |||| || || || | ||| || |
Sbjct 7437 TCGTACTTTTCGTACAGAGCCTCAAACTCCTCACCATAGCAGTCGGCAAGGCCGGGGCAC 7378
Query 110572 TTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCA 110631
| | |||||| | ||| | ||| | || || ||| || | ||||||||| || |||
Sbjct 7377 TCATTGGGACACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCA 7318
Query 110632 GGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGG 110691
|| ||||||| || ||||||||| || ||| |||| || | || |||||
Sbjct 7317 GGGATCCACAGGGCGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTA 7258
Query 110692 CGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATG--- 110748
||||| || | || || | || ||| | |||||| || || || |||| || | |
Sbjct 7257 CGTAGGTCGAGGAACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCA 7198
Query 110749 ---GATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTG 110805
| || ||| | | || |||||| ||||| | || ||| ||||| || | |
Sbjct 7197 CCTGGTCGCTT--GTTG-CCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGG 7141
Query 110806 AGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCA 110865
||||| ||||| | |||| ||| ||| || || || ||| || | |||||
Sbjct 7140 AGCATGGGAATGACGCCATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCA 7081
Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTC 110924
|| ||| ||||| | | ||||| || || ||| || || || || ||
Sbjct 7080 CGGATGCGGTGGACGTTGAGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTC 7021
Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984
| |||| || |||| || || || || || |||| || | | || ||||| ||
Sbjct 7020 T-TGAGCGTGTCATAGATGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGA 6962
Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044
|||| ||| | | || || || |||||||| || || || | || || ||| ||
Sbjct 6961 TGACAGCTGGGCCTGGGGAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGA--AG 6904
Query 111045 ACCTTG--GGACATCTTGTTGTATGTGTC 111071
| |||| |||||| |||||| || ||
Sbjct 6903 AACTTGCTGGACATGAGGTTGTACGTTTC 6875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588961025285200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |