Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1793 264 1e-65 seq1923 102 1e-16 seq1259 87.8 2e-12 >seq1793 Length=11804 Score = 264 bits (292), Expect = 1e-65 Identities = 1119/1743 (64%), Gaps = 51/1743 (3%) Strand=Plus/Minus Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTG 105655 |||||||| || |||||||| || | ||||| || | ||||| || | || ||| Sbjct 8529 TAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATCGAGGTGATTTTG 8470 Query 105656 GACATCGTTGGACTTTCCATGAAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGAC 105713 |||||| || || |||| | |||| ||| |||| ||||||||||| | Sbjct 8469 CCCATCGTGGGGTCTTTCATGTGGATGTTCAGCGACTGCGACT--GGTCAATGAAGGCGC 8412 Query 105714 CACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGA 105773 | || | || ||||| | || || | | | || ||||| || || ||||| Sbjct 8411 CGCGGTCGGCGGCCATCTGAACAACCTGACGCTGCGAAATCTCCCAAACGGTCTTGTAGA 8352 Query 105774 GATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGA 105830 | |||||| || | ||||| | | || ||||| || || || | | || ||| Sbjct 8351 GCGCCTTGATGTCGGCAGGGATGTTGGGAATGTTTTGGATGGATCCGTTCTCGGCAATGA 8292 Query 105831 CCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGAT 105890 || | | |||||| | | |||||| ||||| || | || || |||| ||| Sbjct 8291 ---TGCGGTTCTTCATGGCATCGGACCACAGACCCATGTCGACCAGGTCCTTGAGGAGCC 8235 Query 105891 GCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGT 105950 | ||| || | | ||||| || || | | | | | | |||||||| | ||||| Sbjct 8234 ACGGGTTCACGACCTGGAACTCCCCAGCCAAGACACGGCGCTGGTAGATGTTGGACGTGT 8175 Query 105951 AGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTG 106010 | || || || || ||||| || || | ||| || | ||| ||||| || ||||| || | Sbjct 8174 ATGGCTCGAAACACTCATTGTTGCCGAGGATCTGAGAGGTCGAGGCCGTGGGCATGGGAG 8115 Query 106011 CCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGT 106070 | | ||| | ||| || | ||| | |||||||| | ||||| ||| ||||| | Sbjct 8114 CAAGCAACAAGGAGTTGCGGATACCATGCTCCTTGATTTGCTCCTTCAGATTGTCCCATT 8055 Query 106071 CGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGT 106128 | | ||| || || || || |||| |||| ||||| || || | || | || | Sbjct 8054 CCCACAGTTCAGAA-GGCTTGACGTTCC-ACATGTCAAACTGGAGAATACCCTCCGAGGC 7997 Query 106129 GGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 106188 || || || ||||| || ||| | ||| || | | || | || | ||| Sbjct 7996 AGGTGATCCTTCAAAGGTGGAATAAGGACCCTGCTCCTTGGCAAGCTCCATGGACGCAGT 7937 Query 106189 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 106248 || ||| ||||| || | ||| || || || | |||| ||| || || ||| Sbjct 7936 CAAGGAGGCGTGGTAGACGGTCTCGAAAATCTGCTTGTTCAACTCACGAGCCTCGGGTGA 7877 Query 106249 ATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||| | | || | | | | || | || || ||||| |||||||| | ||| | Sbjct 7876 CTCAAAGG-GCAGACGGAGAGCGAGGAAGGCGTCGGCAAGACCCTGAACACCGACACCGA 7818 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 106367 | |||||||| ||||| || || || || || ||||| ||| || ||| | Sbjct 7817 TGGGTCTGTGGCGCATGTTGCTGTTGCGAGCCTCCTGCACGGGGTAATGGTTGACGTCGA 7758 Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427 ||| |||||| || | || | || || | ||||| || || | | | ||| Sbjct 7757 TGATCTTGTTTAGGTTGCGGACCACGACCTGAGTCACGTCATGCAGCTTCTGAAAGTCAT 7698 Query 106428 AAGTGCGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAA 106484 | |||| ||| | | | ||| | |||||||||| || || | ||||| | Sbjct 7697 AT---CGAGCCTCGTTGTAGTCAACAAAGGCAGGAAGGGCGAGCGAAGCAAGGTTGCAGA 7641 Query 106485 CAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAA 106544 | ||| ||| ||| | | ||| || | ||| || || || | || ||||| | | Sbjct 7640 CGGCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAGAGATTAGAACTTCTGA 7581 Query 106545 TCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGG 106604 | || || | ||||| ||||| ||||| |||||||| |||||||||||||||||| ||| Sbjct 7580 TGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGG 7521 Query 106605 GCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACA 106663 | | || ||||| ||||| | | | ||| | | ||| | | || | | || Sbjct 7520 GGTTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGAGCTTCTGGGCGCGG---- 7465 Query 106664 ATGGCGTTGG--CCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCA 106720 |||| ||| ||| | ||||| |||||||||| ||| || || |||||||||||| Sbjct 7464 ATGGTCTTGCGACCCTTGCCCTCACGCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCA 7405 Query 106721 CCCACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACC 106779 || | || ||||| || || || || | ||||| | |||| ||| | || Sbjct 7404 CC-ATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACATGAGAGTCCAGTCGCCGTT 7346 Query 106780 CTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG--GATGAAAAGAGATCTCTA 106837 || ||| || ||||||||||| || || || ||||||||| || |||| || || | Sbjct 7345 CTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGGCGAGGAAA--AGGTCCCGC 7288 Query 106838 CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCG 106897 ||| |||| || | || ||||| |||| || |||||||| | || ||| ||| Sbjct 7287 GCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAACTCAAAGACATCAGCG 7228 Query 106898 TGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTT 106951 ||||| ||||| || |||| || | | || | | ||| ||| | || | | Sbjct 7227 TGCCAAGGCTCCAGGTAGATGGCAAAGGCACC---TGGTCGCTTGTTGCCACCCTGGTCT 7171 Query 106952 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 107011 ||||| | || ||| ||| || || || ||||| ||||| | |||| || ||| Sbjct 7170 ACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGCCATTGGAAGTACCG 7111 Query 107012 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 107071 || || || ||| || | |||| | | |||| || | ||||| || Sbjct 7110 TTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCG 7051 Query 107072 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 107131 |||||| || ||||| || || | | || || ||||||| || | ||| | Sbjct 7050 CCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCGATGCTG 6991 Query 107132 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATT 107190 || ||||| || ||| |||||||| |||| ||| || || || ||||||||||| Sbjct 6990 TCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTG-GGCCTGGGGAGTACCAGCATT 6932 Query 107191 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCC 107248 ||| ||||| || | ||||| ||| | | |||| |||||| || ||| || || Sbjct 6931 GAAAAGGGTCGGAGAGGCGTGGGTGA--AGAACTTGCTGGACATGAGGTTGTACGTTTCA 6874 Query 107249 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGG 107308 | ||| ||||||| || || |||||||| || |||||||||| ||| | ||| Sbjct 6873 ATGACGCGCTCAATGTTGTCGCCCCAGATGCCGACAGCGACACGCATAATCATATGCTGG 6814 Query 107309 GGT 107311 ||| Sbjct 6813 GGT 6811 >seq1923 Length=107003 Score = 102 bits (112), Expect = 1e-16 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| |||||||| || || || || ||||| || |||||| ||||| Sbjct 7757 GGCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGTTCGTTAGAGAAGGTCAGGCC 7816 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||| | ||||||||||||| |||| | || | | || | ||| ||||||||| Sbjct 7817 GGGCATCAAGCCCCGCTTCTTCAGCCAAAAGATGGAGGCAAAGGCGCCGCTGAAGAAGAT 7876 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451 ||||| ||| ||||| || | | |||| ||||||| | || | |||| | || Sbjct 7877 GCCCTCAACAGCGGCAAAGGCGACTAATCGCTGGGCGAAGCTG-GATTCCTTGTCCTGAA 7935 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 ||| | || ||||| | ||||||||| |||||| || || Sbjct 7936 TCCAGTGAATAGCCCAGTCCGCCTTCTTGCGAATACAGGGAAC 7978 >seq1259 Length=27818 Score = 87.8 bits (96), Expect = 2e-12 Identities = 180/262 (69%), Gaps = 8/262 (3%) Strand=Plus/Plus Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 9430 ||| || || || || ||||||| || || || ||||| |||| | | || || Sbjct 2117 GGCGTCGATTTCGTCGATGAAGATGATGCAAGGGGCATTTTTGCGGCCTTCGGCGAACAG 2176 Query 9431 ATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9489 |||||| ||||| | ||| || ||||||||||| ||||| || | || || || Sbjct 2177 ATCGCGGACCCTCGAAGGGCCGACGCCAACAAACATTTCCACGAACTCTGAACCGCTCAC 2236 Query 9490 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549 || | ||| || || || ||||| ||| |||| ||| | || |||||||| | Sbjct 2237 GCTGAA-GAACGGAACGCCGGACTCACCAGCAGTGGCCTTGGCAATGAGCGTCTTACCAG 2295 Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC-ACTT--CCAAAGT 9606 |||| || ||||| |||| ||||| || || ||||||||||| | || |||| | Sbjct 2296 TACCCGGAGGGCCCGCAAGGATCGCACCGCGCGGGATCTTGGCGCCGAGTTTCTCAAACT 2355 Query 9607 ATCTCTCAGGTTGCTTGAGAAA 9628 |||| || ||||||||||| Sbjct 2356 ---TCTCGGGCTGCTTGAGAAA 2374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589965799738160