Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 141 2e-28
seq1745 136 9e-27
>seq1893
Length=9943
Score = 141 bits (156), Expect = 2e-28
Identities = 160/213 (75%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| || || || ||| ||| || || || ||||||||| ||||| | ||||||||
Sbjct 1316 AACGAGATGCAGGGTGCTCTCCTTCTGGATGTTGTAATCGCTCAGAGTGCGACCATCTTC 1257
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
| |||||| || || || || || ||||| || || |||||||| ||||| || |||||
Sbjct 1256 CAACTGCTTTCCAGCAAAAATGAGACGTTGCTGATCCGGAGGAATACCTTCCTTATCTTG 1197
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGT 195107
|||||| ||||||||| ||||| || || ||| |||||| || | ||||| ||
Sbjct 1196 AATTTTAGACTTGACGTTGTCAATAGTATC---ACTGGATTCCACCTCCAAGGTAATTGT 1140
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| |||||||| ||||| || || | ||||||
Sbjct 1139 CTTGCCTGTCAAGGTTTTGACAAAAATTTGCAT 1107
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || || || || || || || ||||| |||| ||||| | |||||||||
Sbjct 784 ACGAGATGCAGCGTAGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCTTCG 725
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || ||||| || ||||| || ||||| ||||| ||||| || ||||| |||
Sbjct 724 AGTTGCTTGCCAGCGAAAATCAGTCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGA 665
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| ||| |||||| || || |||||||| || || || |||||||| | |||||
Sbjct 664 ATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGACCTCAAGGGTGATGGTCTTG 605
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 604 CCGGTGAGTGTCTTCACGAAAATCTGCAT 576
>seq1745
Length=53961
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|||| || || | ||| || ||| ||| || ||||| ||||| ||| || || |
Sbjct 17013 AGTCGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGG 17072
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| |||||||| || || || ||||| ||||| || || || || || || |||||
Sbjct 17073 CCATCCTCGAGCTGTTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGGGATTCCTTCC 17132
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||| ||||| || |||||| || ||||||||||| ||| ||||| || |||||
Sbjct 17133 TTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTG 17192
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| |||||| || |||| ||||| ||||| | |||||
Sbjct 17193 ATCGTCTTCCCCGTCAGGGTTTTGACGAAGATCTGCAT 17230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109452686216078
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |