Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 347 2e-90
seq1923 141 2e-28
>seq1793
Length=11804
Score = 347 bits (384), Expect = 2e-90
Identities = 858/1281 (67%), Gaps = 53/1281 (4%)
Strand=Plus/Minus
Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475
|||| || |||||||||| |||||| || ||| |||||| | ||| | ||||||||
Sbjct 7938 GTCAAGGAGGCGTGGTAGACGGTCTCGAAAATCTGCTTGTTCAA-CTCACGAGCCTCGGG 7880
Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535
|| ||||||| ||| || | ||| ||||||| || ||||| || |||| |||
Sbjct 7879 TGACTCAAAGGGCAGACGGAGAGCGAGGAAGGCGTCGGCAAGACCCTGAACACCGACACC 7820
Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593
|||||| ||||| | | ||||| | ||| | || ||| |||||| ||| |||||||
Sbjct 7819 GATGGGTCTGTGGCGCATGTTGCTGTTGCGAGC-CTCCTG-CACGGGGTAATGGTTGACG 7762
Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653
||||| | ||||| ||||| | | ||| | | ||| || |||||||||
Sbjct 7761 TCGATGATCTTGTTTAGGTTGCGGACCACGACCTGAGTCACGTCATGCAGCTTCTG---- 7706
Query 221654 TTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTG 221713
|| || ||| ||| |||| | | || ||||| || ||||| |
Sbjct 7705 ---AAAGTCATATCGA-GCC-TCGTTGTAG---TCAACAAAGGCAGGAAGGGCGAGCGAA 7654
Query 221714 GCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGG 221773
|| ||||| || ||||||||||||||| | || || | || ||||| || |||||
Sbjct 7653 GCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAGAGA 7594
Query 221774 TTGCTGCACTT--GATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCT 221831
|| | |||| |||||| || |||| || || || ||| ||| ||| ||||
Sbjct 7593 TTA--GAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCT 7536
Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891
|||||||||| ||||| ||| ||||| |||||| ||| ||| || |||||| |
Sbjct 7535 TGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGAGCT 7476
Query 221892 CTCTGG-CGCTCACCGTCCT------CTTGACTGCACCCTCGGTCTTTTCATACCCGGTA 221944
||||| ||| | ||| | |||| | ||| |||| |||||| |||
Sbjct 7475 -TCTGGGCGCGGATGGTCTTGCGACCCTTGCCCTCACGCTCGTACTTTTCGTAC------ 7423
Query 221945 TAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACAC 222004
||||| | |||||| ||||| || ||| | ||||| || ||| |||||||
Sbjct 7422 -AGAGCCT--CAAACTCCTCACCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACAC 7366
Query 222005 ATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGC 222064
|| ||| |||||| ||| | | ||| | || ||||||||| || |||||||||||
Sbjct 7365 ATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGG 7306
Query 222065 GCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAA 222124
|| | || || || | | || ||||||| ||||| ||| || | || || |
Sbjct 7305 GCGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGG 7246
Query 222125 AACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTG 222184
|||||||| | ||||||||||| |||||||| |||| ||| | || || |||||||||
Sbjct 7245 AACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCACCTGGTCGCTTG 7186
Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGT 222244
||||||||||| || || || || |||||| | || || | || | |
Sbjct 7185 TTGCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACG 7126
Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCA 222304
|| ||||| |||||||||||| |||||| | || ||| | || | | ||
Sbjct 7125 CCATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCAC---GGATGC-GGTG 7070
Query 222305 GAC----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360
||| | ||| || || || || ||| ||||||||||||||| ||||||| |||||
Sbjct 7069 GACGTTGAGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTC 7010
Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420
||||||||| || ||| ||||| | || | || || || || |||| ||| |
Sbjct 7009 ATAGATGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTGGGC 6950
Query 222421 TTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480
| || | || || || || || || ||| |||||| || ||| | || |||||
Sbjct 6949 CTGGGGAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGACAT 6890
Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATC 222539
|| | |||||| || | ||| | | |||||||| ||| || | | | ||| |
Sbjct 6889 GAGGTTGTACGTTTCAATGACGCGCTCAATGTTGTCGCCCCAGATGCCG-ACAGCGACAC 6831
Query 222540 TCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGA 222597
||| ||| | |||||| | ||| ||| || | ||||| || ||||||||
Sbjct 6830 GCATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGCT--TCAGGAGGTACGA 6773
Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGC 222657
| |||||||||||||| |||||||| | | | ||||||||| ||| || | |||
Sbjct 6772 TCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTCTCTGTCGTAGACTATGGC 6713
Query 222658 GGCGTCCAGCTCCGACTTGTG 222678
| ||| |||||| ||||||
Sbjct 6712 AGAGTCAAGCTCCTCCTTGTG 6692
>seq1923
Length=107003
Score = 141 bits (156), Expect = 2e-28
Identities = 297/448 (66%), Gaps = 9/448 (2%)
Strand=Plus/Minus
Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936
|||| | || |||||||| ||||| ||||||||||| |||||||| | ||||| |||
Sbjct 7908 AGCGATTAGTCGCCTTTGCCGCTGTTGAGGGCATCTTCTTCAGCGGCGCCTTTGCCTCCA 7849
Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996
|||| ||||| ||| || ||| |||||||| ||| ||| || ||||| ||||||
Sbjct 7848 TCTTTTGGCTGAAGAAGCGGGGCTTGATGCCCGGCCTGACCTTCTCTAACGAACTCATCT 7789
Query 25997 GCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCC 26056
| ||||||||||| |||| || |||||||||||||| || || ||| || |
Sbjct 7788 CGCGCGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTGCACTCG---CACCTGAAGC 7732
Query 26057 ACAAACCTTC--TCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGA 26113
|| | | | |||| ||| | || | ||||||| || || || ||||||
Sbjct 7731 AC---CGTGCCAGCAAGCAGATCATCAAAGACATCATCACCGACGCCGTCACCATCGAGC 7675
Query 26114 AGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGA 26173
||||||| | | ||||||||| | || ||||
Sbjct 7674 AGGAGTTCCTGACCGAGGCTTTGCCGTGTGCTCTACTCGGCATGAACGCTACTCTGATGA 7615
Query 26174 GCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCT 26233
|| |||||||| | || || |||| || ||| | || || || | | |
Sbjct 7614 AGCAGTACATTGAATTCGTCGCTGACCGCCTCCTGGTCGCTCTCGGCAACGAGAAGGTGT 7555
Query 26234 ACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACT 26293
||| ||| | ||||| || || || ||||||||||| || ||| || ||||||||||
Sbjct 7554 ACAAGACGGCCAACCCCTTTGATTTCATGGAAAACATCTCACTGGGTGGCAAGACCAACT 7495
Query 26294 TCTTTGAAAAGAGGGTCGGCGACTATCA 26321
||||||| ||| | |||||||| || ||
Sbjct 7494 TCTTTGAGAAGCGAGTCGGCGAGTACCA 7467
Score = 93.3 bits (102), Expect = 8e-14
Identities = 178/259 (69%), Gaps = 5/259 (2%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | ||||||||||| || | ||| |||||| |||||||||||||||||
Sbjct 8387 ATTTGGCAAATGTACAAGAAAGCCGAGGCCTCCTTCTGGACAGCCGAAGAGATTGATCTC 8328
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCA---AAGACGAGCAGCATTTTCTCAAG 25593
| ||||| || ||| ||| | || || | | |||||| | | || ||
Sbjct 8327 TCAAAGGATCTGCACGATTGGAATAATCGATTGAATGATGACGAGAAATACTTCATCTCT 8268
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | |||| |||||||| |||||||| || || || |||||||| ||| ||| ||
Sbjct 8267 CACATCCTGGCTTTCTTTGCCGCCTCTGACGGCATCGTCAACGAGAACCTGGTAGAGCGA 8208
Query 25654 TTCACCAGGGAAGTGCA-GTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712
|||| | | || || || || | | || || | || |||||||| || ||||| ||
Sbjct 8207 TTCAGCGGCGAGGTTCAGGTTCCAGAAGCCCGA-TGCTTCTACGGGTTTCAGATCATGAT 8149
Query 25713 CGAAAATGTGCACTCTGAG 25731
|| || | |||||||||
Sbjct 8148 GGAGAACATCCACTCTGAG 8130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928821184120960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |