Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 282 5e-71
seq1923 102 1e-16
>seq1793
Length=11804
Score = 282 bits (312), Expect = 5e-71
Identities = 1124/1740 (65%), Gaps = 47/1740 (3%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| | ||| | ||||| ||||| |||||||| || || ||||||| |||
Sbjct 6812 CCCCAGCATATGATTATGCGTGTCGCTGTCGGCATCTGGGGCGACAACATTGAGCGCGTC 6871
Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| || || ||| || |||||| |||| | | ||| ||||| | || ||||| |
Sbjct 6872 ATTGAAACGTACAACCTCATGTCCAGCAAGTTCT--TCACCCACGCCTCTCCGACCCTTT 6929
Query 75330 TCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
||||||||||||| || || || ||| |||| |||||||| ||| || |||||
Sbjct 6930 TCAATGCTGGTACTCCCCAGGCC-CAGCTGTCATCCTGCTTCCTCGTCGACATGAAGGAT 6988
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
||| ||| | || ||||||| || || | | || || ||||| || ||||
Sbjct 6989 GACAGCATCGAGGGCATCTATGACACGCTCAAGACCTGCGCCATGATCTCCAAAATGGCT 7048
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508
|| || ||||| | || |||| | | |||| | || ||| || ||
Sbjct 7049 GGCGGCATTGGCCTCAACGTCCACCGCATCCGTGCCACTGGCTCATACATTGCTGGCACC 7108
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|| ||| || |||| | ||||| ||||| || || || ||| ||| || | |||
Sbjct 7109 AACGGTACTTCCAATGGCGTCATTCCCATGCTCCGAGTGTTCAACAACACGGCCAGATAT 7168
Query 75569 GTAAATCAAGCGGGGCGTC--GCAAGG-GGT-CCATCGCGGTCTACTTGGAACCATGGCA 75624
||| | || | | ||| | || | ||| || | || ||||| |||| || |||||
Sbjct 7169 GTAGACCAGG-GTGGCAACAAGCGACCAGGTGCCTTTGCCATCTACCTGGAGCCTTGGCA 7227
Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684
|| ||| || | |||||||| || |||| ||||| || | || |||| |||
Sbjct 7228 CGCTGATGTCTTTGAGTTCCTCGACCTACGTAAGAACCACGGCAAGGAGGAGGTTCGCGC 7287
Query 75685 TAGAGATCTCTTTTCATC--CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| || || |||| || ||||||||| || || || ||||||||||| || ||| ||
Sbjct 7288 GCGGGACCT--TTTCCTCGCCCTGTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAG 7345
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTGGG 75801
|| | ||| |||| | ||||| | || || || || ||||| || |||
Sbjct 7346 AACGGCGACTGGACTCTCATGTGTCCCAATGAGTGCCCCGGCCTTGCCGACTGCTATGG- 7404
Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA---GAGG---AGGGTAGAGCCAATGC 75855
|||||||||||| || || ||| |||||| || |||| ||||| | |||
Sbjct 7405 TGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGCGTGAGGGCAAGGGTCG---CAA--- 7458
Query 75856 GACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914
||| | | ||| | || | | ||| | | ||| | || | ||||| ||||| || |
Sbjct 7459 GACCATCCGCGCC-CAGAAGCTCTGGTACTCCATTTTGGAAGCTCAGACTGAGACCGGCA 7517
Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974
|| | ||||| |||||||||||||| ||||||||||| ||||| ||||| | ||||
Sbjct 7518 ACCCCTTCATGCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTAGGAA 7577
Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034
| |||| || || ||||| |||||||| ||| | || ||| | | ||| ||| ||
Sbjct 7578 CCATCAGAAGTTCTAATCTCTGCACGGAGATTATCGAATACTCCGCCCCGGACGAGGTGG 7637
Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT---CAATGAAGAGACTCGCA 76091
| || ||||| | || || |||||||||| | ||| | | | ||| ||||
Sbjct 7638 CCGTCTGCAACCTTGCTTCGCTCGCCCTTCCTGCCTTTGTTGACTACAACGAGGCTCG-- 7695
Query 76092 CTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151
| ||| | | | || || ||||| | || || | || | || ||||||
Sbjct 7696 -ATATGACTTTCAGAAGCTGCATGACGTGACTCAGGTCGTGGTCCGCAACCTAAACAAGA 7754
Query 76152 TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211
|||| ||| || ||| ||||| || || || || || ||||| |||||||
Sbjct 7755 TCATCGACGTCAACCATTACCCCGTGCAGGAGGCTCGCAACAGCAACATGCGCCACAGAC 7814
Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTT 76270
| || ||| | |||||||| ||||| || || | || | | | | || | | |||
Sbjct 7815 CCATCGGTGTCGGTGTTCAGGGTCTTGCCGACGCCTTCCTCGCTCTCCGTCTGC-CCTTT 7873
Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330
|| ||| || || ||| |||| | || || || ||| | || ||||| |||
Sbjct 7874 GAGTCACCCGAGGCTCGTGAGTTGAACAAGCAGATTTTCGAGACCGTCTACCACGCCTCC 7933
Query 76331 CTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCT 76390
|| ||| || | || | | || ||| | ||| || ||||| || ||
Sbjct 7934 TTGACTGCGTCCATGGAGCTTGCCAAGGAGCAGGGTCCTTATTCCACCTTTGAAGGATCA 7993
Query 76391 CCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--T 76448
|| || || | || | || |||||||| |||| |||| || || || || ||| |
Sbjct 7994 CCTGCCTCGGAGGGTATTCTCCAGTTTGACATGT-GGAACGTCAAGCC-TTCTGAACTGT 8051
Query 76449 ACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 76508
|| ||||| ||| ||||| | ||||||||| | ||| | || ||| | |||
Sbjct 8052 GGGAATGGGACAATCTGAAGGAGCAAATCAAGGAGCATGGTATCCGCAACTCCTTGTTGC 8111
Query 76509 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 76568
| || || ||||| || ||||| ||| | || ||| | || || ||||| || || || |
Sbjct 8112 TTGCTCCCATGCCCACGGCCTCGACCTCTCAGATCCTCGGCAACAATGAGTGTTTCGAGC 8171
Query 76569 CATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACA 76628
||||||| | |||||||||| | | | | | || || ||||| | || |||
Sbjct 8172 CATACACGTCCAACATCTACCAGCGCCGTGTCTTGGCTGGGGAGTTCCAGGTCGTGAACC 8231
Query 76629 AGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 76688
| ||| |||| ||||| | || ||||| |||||| | | |||||| | | ||
Sbjct 8232 CGTGGCTCCTCAAGGACCTGGTCGACATGGGTCTGTGGTCCGATGCCATGAAGAACCGCA 8291
Query 76689 TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATC 76748
| | | | || ||||| ||||| || | | ||||| | || |||||| |
Sbjct 8292 TCATTGCCGAGAACGGATCCATCCAAAACATTCCCAACATCCCTGCCGACATCAAGGCGC 8351
Query 76749 TCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTG 76808
||||| || || ||||| || | | | || || | |||||||| || || |
Sbjct 8352 TCTACAAGACCGTTTGGGAGATTTCGCAGCGTCAGGTTGTTCAGATGGCCGCCGACCGCG 8411
Query 76809 GTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTC 76866
| ||||||||| | |||| ||| |||| | |||| || || ||||||
Sbjct 8412 GCGCCTTCATTGACC--AGTCGCAGTCGCTGAACATCCACATGAAAGACCCCACGATGGG 8469
Query 76867 CAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTA 76926
||| || | || ||||| | || ||||| | ||| ||||| || || ||||||||
Sbjct 8470 CAAAATCACCTCGATGCACTTTGCCGGCTGGAAGCTGGGTCTCAAGACGGGCATGTACTA 8529
>seq1923
Length=107003
Score = 102 bits (112), Expect = 1e-16
Identities = 158/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066
|| || |||||| ||||||||| | ||||| || | ||| || | |||| | ||
Sbjct 7978 GTTCCCTGTATTCGCAAGAAGGCGGACTGGGCTATTCACTGGATTCAGGACAAGGAATC- 7920
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
| ||||||| |||| | | || ||||| ||| ||||| ||||||||| ||| |
Sbjct 7919 CAGCTTCGCCCAGCGATTAGTCGCCTTTGCCGCTGTTGAGGGCATCTTCTTCAGCGGCGC 7860
Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186
|| | | || | |||| ||||||||||||| | ||||| ||||| |||||| ||
Sbjct 7859 CTTTGCCTCCATCTTTTGGCTGAAGAAGCGGGGCTTGATGCCCGGCCTGACCTTCTCTAA 7800
Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229
||||| || || || || |||||||| ||| || ||||||
Sbjct 7799 CGAACTCATCTCGCGCGACGAGGGTCTGCACACCGACTTTGCC 7757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596554432217920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |