Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1793 282 5e-71 seq1923 102 1e-16 >seq1793 Length=11804 Score = 282 bits (312), Expect = 5e-71 Identities = 1124/1740 (65%), Gaps = 47/1740 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| | ||| | ||||| ||||| |||||||| || || ||||||| ||| Sbjct 6812 CCCCAGCATATGATTATGCGTGTCGCTGTCGGCATCTGGGGCGACAACATTGAGCGCGTC 6871 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | || || ||| || |||||| |||| | | ||| ||||| | || ||||| | Sbjct 6872 ATTGAAACGTACAACCTCATGTCCAGCAAGTTCT--TCACCCACGCCTCTCCGACCCTTT 6929 Query 75330 TCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 ||||||||||||| || || || ||| |||| |||||||| ||| || ||||| Sbjct 6930 TCAATGCTGGTACTCCCCAGGCC-CAGCTGTCATCCTGCTTCCTCGTCGACATGAAGGAT 6988 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 ||| ||| | || ||||||| || || | | || || ||||| || |||| Sbjct 6989 GACAGCATCGAGGGCATCTATGACACGCTCAAGACCTGCGCCATGATCTCCAAAATGGCT 7048 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || || ||||| | || |||| | | |||| | || ||| || || Sbjct 7049 GGCGGCATTGGCCTCAACGTCCACCGCATCCGTGCCACTGGCTCATACATTGCTGGCACC 7108 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || ||| || |||| | ||||| ||||| || || || ||| ||| || | ||| Sbjct 7109 AACGGTACTTCCAATGGCGTCATTCCCATGCTCCGAGTGTTCAACAACACGGCCAGATAT 7168 Query 75569 GTAAATCAAGCGGGGCGTC--GCAAGG-GGT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 ||| | || | | ||| | || | ||| || | || ||||| |||| || ||||| Sbjct 7169 GTAGACCAGG-GTGGCAACAAGCGACCAGGTGCCTTTGCCATCTACCTGGAGCCTTGGCA 7227 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || ||| || | |||||||| || |||| ||||| || | || |||| ||| Sbjct 7228 CGCTGATGTCTTTGAGTTCCTCGACCTACGTAAGAACCACGGCAAGGAGGAGGTTCGCGC 7287 Query 75685 TAGAGATCTCTTTTCATC--CCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | || || |||| || ||||||||| || || || ||||||||||| || ||| || Sbjct 7288 GCGGGACCT--TTTCCTCGCCCTGTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAG 7345 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTGGG 75801 || | ||| |||| | ||||| | || || || || ||||| || ||| Sbjct 7346 AACGGCGACTGGACTCTCATGTGTCCCAATGAGTGCCCCGGCCTTGCCGACTGCTATGG- 7404 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA---GAGG---AGGGTAGAGCCAATGC 75855 |||||||||||| || || ||| |||||| || |||| ||||| | ||| Sbjct 7405 TGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGCGTGAGGGCAAGGGTCG---CAA--- 7458 Query 75856 GACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAA 75914 ||| | | ||| | || | | ||| | | ||| | || | ||||| ||||| || | Sbjct 7459 GACCATCCGCGCC-CAGAAGCTCTGGTACTCCATTTTGGAAGCTCAGACTGAGACCGGCA 7517 Query 75915 CACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAA 75974 || | ||||| |||||||||||||| ||||||||||| ||||| ||||| | |||| Sbjct 7518 ACCCCTTCATGCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTAGGAA 7577 Query 75975 CAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGG 76034 | |||| || || ||||| |||||||| ||| | || ||| | | ||| ||| || Sbjct 7578 CCATCAGAAGTTCTAATCTCTGCACGGAGATTATCGAATACTCCGCCCCGGACGAGGTGG 7637 Query 76035 CTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT---CAATGAAGAGACTCGCA 76091 | || ||||| | || || |||||||||| | ||| | | | ||| |||| Sbjct 7638 CCGTCTGCAACCTTGCTTCGCTCGCCCTTCCTGCCTTTGTTGACTACAACGAGGCTCG-- 7695 Query 76092 CTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAG 76151 | ||| | | | || || ||||| | || || | || | || |||||| Sbjct 7696 -ATATGACTTTCAGAAGCTGCATGACGTGACTCAGGTCGTGGTCCGCAACCTAAACAAGA 7754 Query 76152 TCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGAC 76211 |||| ||| || ||| ||||| || || || || || ||||| ||||||| Sbjct 7755 TCATCGACGTCAACCATTACCCCGTGCAGGAGGCTCGCAACAGCAACATGCGCCACAGAC 7814 Query 76212 CTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTT 76270 | || ||| | |||||||| ||||| || || | || | | | | || | | ||| Sbjct 7815 CCATCGGTGTCGGTGTTCAGGGTCTTGCCGACGCCTTCCTCGCTCTCCGTCTGC-CCTTT 7873 Query 76271 GATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCC 76330 || ||| || || ||| |||| | || || || ||| | || ||||| ||| Sbjct 7874 GAGTCACCCGAGGCTCGTGAGTTGAACAAGCAGATTTTCGAGACCGTCTACCACGCCTCC 7933 Query 76331 CTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCT 76390 || ||| || | || | | || ||| | ||| || ||||| || || Sbjct 7934 TTGACTGCGTCCATGGAGCTTGCCAAGGAGCAGGGTCCTTATTCCACCTTTGAAGGATCA 7993 Query 76391 CCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--T 76448 || || || | || | || |||||||| |||| |||| || || || || ||| | Sbjct 7994 CCTGCCTCGGAGGGTATTCTCCAGTTTGACATGT-GGAACGTCAAGCC-TTCTGAACTGT 8051 Query 76449 ACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 76508 || ||||| ||| ||||| | ||||||||| | ||| | || ||| | ||| Sbjct 8052 GGGAATGGGACAATCTGAAGGAGCAAATCAAGGAGCATGGTATCCGCAACTCCTTGTTGC 8111 Query 76509 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 76568 | || || ||||| || ||||| ||| | || ||| | || || ||||| || || || | Sbjct 8112 TTGCTCCCATGCCCACGGCCTCGACCTCTCAGATCCTCGGCAACAATGAGTGTTTCGAGC 8171 Query 76569 CATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACA 76628 ||||||| | |||||||||| | | | | | || || ||||| | || ||| Sbjct 8172 CATACACGTCCAACATCTACCAGCGCCGTGTCTTGGCTGGGGAGTTCCAGGTCGTGAACC 8231 Query 76629 AGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCA 76688 | ||| |||| ||||| | || ||||| |||||| | | |||||| | | || Sbjct 8232 CGTGGCTCCTCAAGGACCTGGTCGACATGGGTCTGTGGTCCGATGCCATGAAGAACCGCA 8291 Query 76689 TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATC 76748 | | | | || ||||| ||||| || | | ||||| | || |||||| | Sbjct 8292 TCATTGCCGAGAACGGATCCATCCAAAACATTCCCAACATCCCTGCCGACATCAAGGCGC 8351 Query 76749 TCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTG 76808 ||||| || || ||||| || | | | || || | |||||||| || || | Sbjct 8352 TCTACAAGACCGTTTGGGAGATTTCGCAGCGTCAGGTTGTTCAGATGGCCGCCGACCGCG 8411 Query 76809 GTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTC 76866 | ||||||||| | |||| ||| |||| | |||| || || |||||| Sbjct 8412 GCGCCTTCATTGACC--AGTCGCAGTCGCTGAACATCCACATGAAAGACCCCACGATGGG 8469 Query 76867 CAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTA 76926 ||| || | || ||||| | || ||||| | ||| ||||| || || |||||||| Sbjct 8470 CAAAATCACCTCGATGCACTTTGCCGGCTGGAAGCTGGGTCTCAAGACGGGCATGTACTA 8529 >seq1923 Length=107003 Score = 102 bits (112), Expect = 1e-16 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066 || || |||||| ||||||||| | ||||| || | ||| || | |||| | || Sbjct 7978 GTTCCCTGTATTCGCAAGAAGGCGGACTGGGCTATTCACTGGATTCAGGACAAGGAATC- 7920 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 | ||||||| |||| | | || ||||| ||| ||||| ||||||||| ||| | Sbjct 7919 CAGCTTCGCCCAGCGATTAGTCGCCTTTGCCGCTGTTGAGGGCATCTTCTTCAGCGGCGC 7860 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 || | | || | |||| ||||||||||||| | ||||| ||||| |||||| || Sbjct 7859 CTTTGCCTCCATCTTTTGGCTGAAGAAGCGGGGCTTGATGCCCGGCCTGACCTTCTCTAA 7800 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 ||||| || || || || |||||||| ||| || |||||| Sbjct 7799 CGAACTCATCTCGCGCGACGAGGGTCTGCACACCGACTTTGCC 7757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596554432217920