Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1745 89.7 9e-13 >seq1745 Length=53961 Score = 89.7 bits (98), Expect = 9e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 ||||| || ||||| || | || ||| ||||| || || |||||||| || || || || Sbjct 17085 TGTTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTGAATC 17144 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | ||| ||| || ||||||||||| || || || || || || || || Sbjct 17145 TTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCC 17204 Query 193335 GTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || ||||| || || || ||||| || Sbjct 17205 GTCAGGGTTTTGACGAAGATCTGCATCTT 17233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899631526286880