Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 136 1e-26
seq1923 114 4e-20
seq1430 111 5e-19
>seq1793
Length=11804
Score = 136 bits (150), Expect = 1e-26
Identities = 345/521 (66%), Gaps = 13/521 (2%)
Strand=Plus/Minus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
|||||| | |||||| ||| || |||||||| ||||||| |||| |||||||||||
Sbjct 7618 GTATTCGATAATCTCCGTGCAGAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTT 7559
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|| |||| |||||||||||||| || ||| | ||| | || ||||| |||| ||
Sbjct 7558 GCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGC 7499
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGA 155809
|||| ||| |||||| | |||| || |||| |||| ||
Sbjct 7498 TTCCAAAATGGAGTACCAGAGCTTCTGGGCGCGGATGGTCTTGCGACCCTTGCCCTCACG 7439
Query 155810 CTCATA--TTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867
||| || |||| || | ||| | | |||||||| || || || || || |||
Sbjct 7438 CTCGTACTTTTCGTACAGAGCCT--CAAACTCCTCACCATAGCAGTCGGCAAGGCCGGGG 7381
Query 155868 CACTTATCGGGGCAAAACAGCGACCA---AATTTTATTACCGATTACACGCTCCATAAAT 155924
|||| || ||| || | || | ||| || || || ||||||| ||| ||
Sbjct 7380 CACTCATTGGGACACATGAGAGTCCAGTCGCCGTTCTTCTCG---ACACGCTTCATGAAG 7324
Query 155925 ACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGA 155984
| |||| ||| | || ||||||||||| || |||||| | ||||||
Sbjct 7323 AGATCAGGGATCCACAGGGCGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGG 7264
Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044
||||| ||||| || | ||| || | ||||| || |||||||| || || |||
Sbjct 7263 TTCTTACGTAGGTCGAGGAACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCA 7204
Query 156045 AAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101
|| ||| | | ||||||||||| |||||||| | || || || ||||| ||
Sbjct 7203 AAGGCACCTGGTCGCTTGTTGCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACT 7144
Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142
| ||||| ||||| | ||||||||||| || ||||| ||
Sbjct 7143 CGGAGCATGGGAATGACGCCATTGGAAGTACCGTTGGTGCC 7103
>seq1923
Length=107003
Score = 114 bits (126), Expect = 4e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496
|||| |||||| ||||| | |||||||||||| | ||||| ||||||||| | |
Sbjct 7977 TTCCCTGTATTCGCAAGAAGGCGGACTGGGCTATTCACTGGATTCAGGACAAGGAATCCA 7918
Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556
| || || || | || || ||||| | || |||||||| || ||||| || || |
Sbjct 7917 GCTTCGCCCAGCGATTAGTCGCCTTTGCCGCTGTTGAGGGCATCTTCTTCAGCGGCGCCT 7858
Query 133557 TCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACG 133616
| ||| || |||||||| || ||||| || | | || || ||| || |||||||
Sbjct 7857 TTGCCTCCATCTTTTGGCTGAAGAAGCGGGGCTTGATGCCCGGCCTGACCTTCTCTAACG 7798
Query 133617 AACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
|||| || || | ||||||| || |||||||| ||||||
Sbjct 7797 AACTCATCTCGCGCGACGAGGGTCTGCACACCGACTTTGCC 7757
>seq1430
Length=20950
Score = 111 bits (122), Expect = 5e-19
Identities = 191/275 (69%), Gaps = 2/275 (1%)
Strand=Plus/Minus
Query 302593 CGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGA 302652
|| |||||||| || ||||| || || || || || |||||||| ||||| | |||
Sbjct 16877 CGTCGCTGAATGTACCCAGTCTCAGCAGTCTTCACCGCAGTATCAATCAGACCTTCCCGA 16818
Query 302653 CCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTC 302711
||| |||| || |||||||| | ||| || ||| | || | | | || ||||
Sbjct 16817 CCAGCCATGGCGTGGAAGAAGAACTCGGTAGG-CGTCAAGCCACGGAGGTATGAATTCTC 16759
Query 302712 AACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTT 302771
|||||| ||||| |||||||| || | |||| |||||| ||||| |||||||| | |
Sbjct 16758 AACGAAGCCACGAGCCTCGGGAGAGTAGTCGTCCTTGGTGAAGTGCGGCAGGGTGCGATA 16699
Query 302772 CTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCAT 302831
|| | || | ||||||||||| || || ||| | || || || | | | ||||
Sbjct 16698 CTTGAATCCAAAGGGGATACGCTTGCCTTCGACGATTTGTTGCCCGACCAGAGCAGTCAT 16639
Query 302832 CTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866
||| || || || | | ||||||||| ||||
Sbjct 16638 CTGGGAGATGTTAATGGAAGAGCCCTTGGAACCAG 16604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471779243513458
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |