Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 212 6e-50
seq1745 123 2e-23
seq1893 118 1e-21
>seq1793
Length=11804
Score = 212 bits (234), Expect = 6e-50
Identities = 1070/1678 (64%), Gaps = 64/1678 (4%)
Strand=Plus/Minus
Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGC--GGTATTGTTGCAATATTTT 138415
|||||||| ||||||||||| || | | |||||| || || | | ||| ||||
Sbjct 8373 ATCTCCCAAACGGTCTTGTAGAG--CGCCTTGATGTCGGCAGGGATGTTGGGAATGTTTT 8316
Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACT 138475
| ||| ||||| | ||||||||||| || ||||| ||||| ||||| || |
Sbjct 8315 GGATGGATCCGTTCTCGGCAATGATGCGGTTCTTCATGGCATCGGACCACAGACCCATGT 8256
Query 138476 TGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535
|| || ||| || | || | ||| | |||||| || || || ||||| || || |
Sbjct 8255 CGACCAGGTCCTTGAGGAGCCACGGGTTCACGACCTGGAACTCCCCAGCCAAGACACGGC 8196
Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595
| ||| |||||| ||| | ||||| || | || ||||| || || ||||||| |
Sbjct 8195 GCTGGTAGATGTTGGACGTGTATGGCTCGAAACACTCATTGTTGCCGAGGATCTGAGAGG 8136
Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655
| | || || |||||| || | ||| | || || || | ||| || |||||||
Sbjct 8135 TCGAGGCCGTGGGCATGGGAGCAAGCAACAAGGAGTTGCGGATACCATGCTCCTTGATTT 8076
Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715
| ||||| || ||| ||||||| || ||| || ||||||||| || |||
Sbjct 8075 GCTCCTTCAGATTGTCCCATTCCCACAGTTCAGAAGGCTTGACGTTCCACATGTCAAACT 8016
Query 138716 GTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATA--CACCAAACTCTTG 138773
| | || ||| || || ||||| | | | | ||| ||| ||| |
Sbjct 8015 GGAGAATACCCTCCGAGGCAGGTGATCCTTCAAAGG--TGGAATAAGGACCCTGCTCCTT 7958
Query 138774 CGCCAACTCGTTGCTCGC-CTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGAT 138832
|| | ||| || ||| || || | | | ||| | || ||| |||||||| |
Sbjct 7957 GGCAAGCTCCATGGACGCAGTCAAG-GAGGCGTGGTAGACGGTCTCGAAAATCTGCTTGT 7899
Query 138833 TGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCG-TGAACGCGTCGGCC 138891
| | | || ||||||| ||| | |||| ||||| | || ||| ||||||||
Sbjct 7898 TCAACTCACGAGCCTCGGGTGACTCAAAGGGCAGACGGAG-AGCGAGGAAGGCGTCGGCA 7840
Query 138892 AGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC 138950
|| || || || || || |||| || | ||||||| || ||| ||||| || ||
Sbjct 7839 AGACCCTGAACACCGACACCGATGGGTCTGTGGCGCA----TGTTGCTGTTGCGAGCCTC 7784
Query 138951 ---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGT 139007
| || |||| ||| || |||||||| ||||||| || || || || |||| |||
Sbjct 7783 CTGCACGGGGTAATGGTTGACGTCGATGATCTTGTTTAGGTTGCGGACCACGACCTGAGT 7724
Query 139008 --CGT-ATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGA 139063
||| |||| | | | | ||| || ||| || |||||| ||| || | | |
Sbjct 7723 CACGTCATGC----AGCTTCTGAAAGTCATATCGAGCCTCGTTGTAGTCAACAAAGGCAG 7668
Query 139064 CAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGT 139123
|| | | | ||| || | |||||| || ||||| ||||| ||| || ||
Sbjct 7667 GAA------GGGC---GAGCGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGT 7617
Query 139124 ATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGC 139183
|||||| ||| || | || | |||| || |||| || |||| || | || ||||
Sbjct 7616 ATTCGATAATCTCCGTGCAGAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGC 7557
Query 139184 TTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCT 139243
| || ||| |||||||| ||||| ||||| | || |||| || || || | |
Sbjct 7556 TCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTT 7497
Query 139244 CTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGCACGTAAAGTT--CGTCGCG 139301
| | |||| | | | | | | || | | | | | || | || | || ||
Sbjct 7496 CCAAAATGGAGTACCAGAGCTTCTGGGCGCGGA-TGGTCTTGCG-ACCCTTGCCCTCACG 7439
Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361
||||||||||||||| || | || || ||||| ||| ||| | ||| || | ||
Sbjct 7438 CTCGTACTTTTCGTACAGAGCCTCAAACTCCTCACCATAGCAGTCGGCAAGGCCGGGGCA 7379
Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421
|| | ||||||||||| | ||| |||||||| || ||| ||| ||||||| |||||
Sbjct 7378 CTCATTGGGACACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATC 7319
Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACC---CATGTT 139478
|| ||||||| |||| | | || ||||| || ||| || | ||
Sbjct 7318 AGGGATCCACAGGGCGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTT 7259
Query 139479 ACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCAT 139538
|||| | || ||||| ||||| || ||||||||||| || ||||| |||||||| |
Sbjct 7258 ACGT---AGGTCGAGGAACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAA 7202
Query 139539 TGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCG 139595
|| ||| || |||||||| || || || | || | | || ||||| || ||
Sbjct 7201 GGCACCTGGTCGCTTGTTGCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCG 7142
Query 139596 CAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGC 139651
| ||| || | || | | || |||||||| || | | ||| | | ||
Sbjct 7141 GAGCATGGGAATGACGCCATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGT--- 7085
Query 139652 GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGC 139711
|| |||| | || || |||| ||| || ||||| | | |||||| || | |||
Sbjct 7084 -GGCACGGATGCGGTGGACGTTGAGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGC 7026
Query 139712 A-ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAG 139770
| || | | || || || || || |||||||| |||| ||| ||| || |||
Sbjct 7025 AGGTCTTG-AGCGTGTCATAGATGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAG 6967
Query 139771 CATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTG 139830
|| || || || || | | || || || || || || ||| ||||| |||
Sbjct 6966 CAGGATGACAGCTGGGCCTGGGGAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTG 6907
Query 139831 AACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGG 139890
|| | | | ||||| | | ||||||||| ||| ||| | |||| | || |
Sbjct 6906 AAGAACTTGCTGGACATGAGGTTGTACGTTTCAATGACGCGCTCAATGTTGTCGCCCCAG 6847
Query 139891 ATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtt 139950
|| ||||||| ||| ||||| | |||||| ||| || ||| | | | ||| | ||
Sbjct 6846 ATGCCGACAGCGACACGCATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGC 6787
Query 139951 tttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
|| || || | || ||| || |||||| ||||||||||| || ||||| ||
Sbjct 6786 TTCAGGAGGTACGATCG--CTCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTC 6731
>seq1745
Length=53961
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||||||||| | ||||| || || || || || || || ||||| || || | |
Sbjct 17231 GATGCAGATCTTCGTCAAAACCCTGACGGGGAAGACGATCACCCTCGAGGTGGAGTCTTC 17172
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || ||||| || ||||| |||||||| || || |||||
Sbjct 17171 CGACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCA 17112
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || | |||||||| || |||||||| |||||| | | | || || || ||
Sbjct 17111 GCAGCGACTCATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACCCTGAGCGACTACAA 17052
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933
|||||| ||||| || || ||||||||| ||||| ||||||| || ||
Sbjct 17051 CATTCAGAAGGAGAGCACCCTCCACTTGGTGCTGCGACTGCGCGGGGGAGG 17001
>seq1893
Length=9943
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || || || || || ||||| ||||| || || || ||||||| | || |
Sbjct 894 AAGACCCTGACTGGCAAGACCATTACCCTCGAGGTTGAGTCCTCCGACACTATTGACAAC 953
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || |||||| || || || ||||| || ||||| || || |||||| |||| ||
Sbjct 954 GTCAAGTCAAAGATTCAGGATAAGGAAGGGATCCCTCCGGACCAGCAACGTCTGATTTTC 1013
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
|| || || || || || ||| | | | | | || || || |||||||||||||||||
Sbjct 1014 GCTGGCAAGCAACTTGAAGATGGGCGCACCCTCTCCGACTACAACATTCAAAAGGAATCA 1073
Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||||| || ||||||||||| | || || |||
Sbjct 1074 ACACTTCATTTGGTGTTGCGTCTCCGAGGTGGC 1106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449886161353520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |