Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1793 212 6e-50 seq1745 123 2e-23 seq1893 118 1e-21 >seq1793 Length=11804 Score = 212 bits (234), Expect = 6e-50 Identities = 1070/1678 (64%), Gaps = 64/1678 (4%) Strand=Plus/Minus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGC--GGTATTGTTGCAATATTTT 138415 |||||||| ||||||||||| || | | |||||| || || | | ||| |||| Sbjct 8373 ATCTCCCAAACGGTCTTGTAGAG--CGCCTTGATGTCGGCAGGGATGTTGGGAATGTTTT 8316 Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACT 138475 | ||| ||||| | ||||||||||| || ||||| ||||| ||||| || | Sbjct 8315 GGATGGATCCGTTCTCGGCAATGATGCGGTTCTTCATGGCATCGGACCACAGACCCATGT 8256 Query 138476 TGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535 || || ||| || | || | ||| | |||||| || || || ||||| || || | Sbjct 8255 CGACCAGGTCCTTGAGGAGCCACGGGTTCACGACCTGGAACTCCCCAGCCAAGACACGGC 8196 Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595 | ||| |||||| ||| | ||||| || | || ||||| || || ||||||| | Sbjct 8195 GCTGGTAGATGTTGGACGTGTATGGCTCGAAACACTCATTGTTGCCGAGGATCTGAGAGG 8136 Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655 | | || || |||||| || | ||| | || || || | ||| || ||||||| Sbjct 8135 TCGAGGCCGTGGGCATGGGAGCAAGCAACAAGGAGTTGCGGATACCATGCTCCTTGATTT 8076 Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715 | ||||| || ||| ||||||| || ||| || ||||||||| || ||| Sbjct 8075 GCTCCTTCAGATTGTCCCATTCCCACAGTTCAGAAGGCTTGACGTTCCACATGTCAAACT 8016 Query 138716 GTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATA--CACCAAACTCTTG 138773 | | || ||| || || ||||| | | | | ||| ||| ||| | Sbjct 8015 GGAGAATACCCTCCGAGGCAGGTGATCCTTCAAAGG--TGGAATAAGGACCCTGCTCCTT 7958 Query 138774 CGCCAACTCGTTGCTCGC-CTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGAT 138832 || | ||| || ||| || || | | | ||| | || ||| |||||||| | Sbjct 7957 GGCAAGCTCCATGGACGCAGTCAAG-GAGGCGTGGTAGACGGTCTCGAAAATCTGCTTGT 7899 Query 138833 TGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCG-TGAACGCGTCGGCC 138891 | | | || ||||||| ||| | |||| ||||| | || ||| |||||||| Sbjct 7898 TCAACTCACGAGCCTCGGGTGACTCAAAGGGCAGACGGAG-AGCGAGGAAGGCGTCGGCA 7840 Query 138892 AGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC 138950 || || || || || || |||| || | ||||||| || ||| ||||| || || Sbjct 7839 AGACCCTGAACACCGACACCGATGGGTCTGTGGCGCA----TGTTGCTGTTGCGAGCCTC 7784 Query 138951 ---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGT 139007 | || |||| ||| || |||||||| ||||||| || || || || |||| ||| Sbjct 7783 CTGCACGGGGTAATGGTTGACGTCGATGATCTTGTTTAGGTTGCGGACCACGACCTGAGT 7724 Query 139008 --CGT-ATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGA 139063 ||| |||| | | | | ||| || ||| || |||||| ||| || | | | Sbjct 7723 CACGTCATGC----AGCTTCTGAAAGTCATATCGAGCCTCGTTGTAGTCAACAAAGGCAG 7668 Query 139064 CAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGT 139123 || | | | ||| || | |||||| || ||||| ||||| ||| || || Sbjct 7667 GAA------GGGC---GAGCGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGT 7617 Query 139124 ATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGC 139183 |||||| ||| || | || | |||| || |||| || |||| || | || |||| Sbjct 7616 ATTCGATAATCTCCGTGCAGAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGC 7557 Query 139184 TTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCT 139243 | || ||| |||||||| ||||| ||||| | || |||| || || || | | Sbjct 7556 TCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTT 7497 Query 139244 CTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGCACGTAAAGTT--CGTCGCG 139301 | | |||| | | | | | | || | | | | | || | || | || || Sbjct 7496 CCAAAATGGAGTACCAGAGCTTCTGGGCGCGGA-TGGTCTTGCG-ACCCTTGCCCTCACG 7439 Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361 ||||||||||||||| || | || || ||||| ||| ||| | ||| || | || Sbjct 7438 CTCGTACTTTTCGTACAGAGCCTCAAACTCCTCACCATAGCAGTCGGCAAGGCCGGGGCA 7379 Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421 || | ||||||||||| | ||| |||||||| || ||| ||| ||||||| ||||| Sbjct 7378 CTCATTGGGACACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATC 7319 Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACC---CATGTT 139478 || ||||||| |||| | | || ||||| || ||| || | || Sbjct 7318 AGGGATCCACAGGGCGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTT 7259 Query 139479 ACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCAT 139538 |||| | || ||||| ||||| || ||||||||||| || ||||| |||||||| | Sbjct 7258 ACGT---AGGTCGAGGAACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAA 7202 Query 139539 TGCGCCTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCG 139595 || ||| || |||||||| || || || | || | | || ||||| || || Sbjct 7201 GGCACCTGGTCGCTTGTTGCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCG 7142 Query 139596 CAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT----GCTACGGATGGGACTGTTGC 139651 | ||| || | || | | || |||||||| || | | ||| | | || Sbjct 7141 GAGCATGGGAATGACGCCATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGT--- 7085 Query 139652 GAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGC 139711 || |||| | || || |||| ||| || ||||| | | |||||| || | ||| Sbjct 7084 -GGCACGGATGCGGTGGACGTTGAGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGC 7026 Query 139712 A-ATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAG 139770 | || | | || || || || || |||||||| |||| ||| ||| || ||| Sbjct 7025 AGGTCTTG-AGCGTGTCATAGATGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAG 6967 Query 139771 CATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTG 139830 || || || || || | | || || || || || || ||| ||||| ||| Sbjct 6966 CAGGATGACAGCTGGGCCTGGGGAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTG 6907 Query 139831 AACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGG 139890 || | | | ||||| | | ||||||||| ||| ||| | |||| | || | Sbjct 6906 AAGAACTTGCTGGACATGAGGTTGTACGTTTCAATGACGCGCTCAATGTTGTCGCCCCAG 6847 Query 139891 ATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtt 139950 || ||||||| ||| ||||| | |||||| ||| || ||| | | | ||| | || Sbjct 6846 ATGCCGACAGCGACACGCATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGC 6787 Query 139951 tttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 || || || | || ||| || |||||| ||||||||||| || ||||| || Sbjct 6786 TTCAGGAGGTACGATCG--CTCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTC 6731 >seq1745 Length=53961 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | ||||| || || || || || || || ||||| || || | | Sbjct 17231 GATGCAGATCTTCGTCAAAACCCTGACGGGGAAGACGATCACCCTCGAGGTGGAGTCTTC 17172 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | || | || || ||||| || ||||| |||||||| || || ||||| Sbjct 17171 CGACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCA 17112 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || | |||||||| || |||||||| |||||| | | | || || || || Sbjct 17111 GCAGCGACTCATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACCCTGAGCGACTACAA 17052 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 |||||| ||||| || || ||||||||| ||||| ||||||| || || Sbjct 17051 CATTCAGAAGGAGAGCACCCTCCACTTGGTGCTGCGACTGCGCGGGGGAGG 17001 >seq1893 Length=9943 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || || || || ||||| ||||| || || || ||||||| | || | Sbjct 894 AAGACCCTGACTGGCAAGACCATTACCCTCGAGGTTGAGTCCTCCGACACTATTGACAAC 953 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||| || || || ||||| || ||||| || || |||||| |||| || Sbjct 954 GTCAAGTCAAAGATTCAGGATAAGGAAGGGATCCCTCCGGACCAGCAACGTCTGATTTTC 1013 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || || || || || ||| | | | | | || || || ||||||||||||||||| Sbjct 1014 GCTGGCAAGCAACTTGAAGATGGGCGCACCCTCTCCGACTACAACATTCAAAAGGAATCA 1073 Query 24899 ACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| || ||||||||||| | || || ||| Sbjct 1074 ACACTTCATTTGGTGTTGCGTCTCCGAGGTGGC 1106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449886161353520