Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 122 6e-23
seq1745 105 4e-18
seq1479 98.7 6e-16
>seq1893
Length=9943
Score = 122 bits (134), Expect = 6e-23
Identities = 147/198 (74%), Gaps = 8/198 (4%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||| ||||| ||||| || || | || |||| || |||||||| || |||||
Sbjct 766 TCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCTTCGAGTTGCTTGCCAGCGAAA 707
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||||||| |||||||| | || | ||||||||||| | || ||| ||||| ||
Sbjct 706 ATCAGTCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTTGACTTGAC--AT 649
Query 34907 GCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962
| ||||| || | |||||| |||| ||| |||||||| || ||||| |||||
Sbjct 648 --TGTCGATGGTGTCGGATGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGTGTCTT 591
Query 34963 TACAAAGATCTGCATGAT 34980
|| || |||||||||||
Sbjct 590 CACGAAAATCTGCATGAT 573
Score = 111 bits (122), Expect = 1e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||| |||||||| ||||| || ||| ||||| |||| || |||||||| || |||||
Sbjct 1069 TCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGCCCATCTTCAAGTTGCTTGCCAGCGAAA 1010
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
||||| ||||||||||| | || | ||| ||||| || | || ||| ||||||
Sbjct 1009 ATCAGACGTTGCTGGTCCGGAGGGATCCCTTCCTTATCCTGAATCTTTGACTTGACGTTG 950
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| || | || || ||| || || | ||| |||||||| || || |||||||| ||
Sbjct 949 TCAATAGTGTCGGAGGACTCAACCTCGAGGGTAATGGTCTTGCCAGTCAGGGTCTTGAC 891
Score = 96.9 bits (106), Expect = 2e-15
Identities = 165/238 (69%), Gaps = 1/238 (0%)
Strand=Plus/Minus
Query 34742 CAATCATTTCC-TCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTT 34800
|||||||| || ||| | || | || || || || | ||||||||||||||| |||||
Sbjct 1343 CAATCATTGCCCTCCACGCAGGCGAAGAACGAGATGCAGGGTGCTCTCCTTCTGGATGTT 1284
Query 34801 ATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTG 34860
|| || || |||| |||| |||| |||||||| || || || || ||||||||
Sbjct 1283 GTAATCGCTCAGAGTGCGACCATCTTCCAACTGCTTTCCAGCAAAAATGAGACGTTGCTG 1224
Query 34861 GTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATT 34920
|| | || | || ||||| || | ||||| |||||| | || | ||| |
Sbjct 1223 ATCCGGAGGAATACCTTCCTTATCTTGAATTTTAGACTTGACGTTGTCAATAGTATCACT 1164
Query 34921 GGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || || || | ||| || ||||| || || | ||| || ||||| || ||||||
Sbjct 1163 GGATTCCACCTCCAAGGTAATTGTCTTGCCTGTCAAGGTTTTGACAAAAATTTGCATG 1106
>seq1745
Length=53961
Score = 105 bits (116), Expect = 4e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | ||||||||||||||||||||| ||||| ||| |||| ||||
Sbjct 17018 CAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATC 17077
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || || || || || ||||| ||||| ||||| || | || | || ||||||||
Sbjct 17078 CTCGAGCTGTTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGGGATTCCTTCCTTGTC 17137
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || ||||| | || | || | ||| || || | ||| || ||
Sbjct 17138 CTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATCGT 17197
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| ||||| ||||| || || |||||||||||
Sbjct 17198 CTTCCCCGTCAGGGTTTTGACGAAGATCTGCAT 17230
>seq1479
Length=130260
Score = 98.7 bits (108), Expect = 6e-16
Identities = 134/185 (72%), Gaps = 8/185 (4%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||| || || || ||||| || ||| | || |||| || |||||||| |||||||| |
Sbjct 49445 CCTTTTGGATATTGTAGTCGGACAGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCGAAAA 49504
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| ||| |||||||| | || | ||||||||||| | ||||| ||||| ||
Sbjct 49505 TCAATCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATTTTAGACTTGAC--AT- 49561
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| ||| || |||||| || | ||| ||||| || ||||| || |||||
Sbjct 49562 -TGTCGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTTTTACCCGTCAGCGTCTTC 49620
Query 34964 ACAAA 34968
|| ||
Sbjct 49621 ACGAA 49625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325684726279046
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |