Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1745 111 1e-19
seq1893 91.5 1e-13
>seq1745
Length=53961
Score = 111 bits (122), Expect = 1e-19
Identities = 157/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
|||| |||| ||||| || | | | ||| || ||||||||||||||||||| |||
Sbjct 17010 CGCAGTCGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTG 17069
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| ||| ||||||||||| || | | |||| || ||||| ||||| || || || |||
Sbjct 17070 CGGCCATCCTCGAGCTGTTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGGGATTCCT 17129
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
|| || || ||| || || | | || | || |||| | |||||| ||||
Sbjct 17130 TCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCGAGG 17189
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||| || || ||||| ||||| | ||| ||||||||
Sbjct 17190 GTGATCGTCTTCCCCGTCAGGGTTTTGACGAAGATCTGCAT 17230
>seq1893
Length=9943
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| |||||||| | |||| || |||||||||||||||||| | ||| ||| |
Sbjct 1093 CGCAACACCAAATGAAGTGTTGATTCCTTTTGAATGTTGTAGTCGGAGAGGGTGCGCCCA 1034
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| || || || || | | || ||||| || || || ||||| || ||||| |||
Sbjct 1033 TCTTCAAGTTGCTTGCCAGCGAAAATCAGACGTTGCTGGTCCGGAGGGATCCCTTCCTTA 974
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| ||| || | | || | ||| |||| | ||| || |||| || |
Sbjct 973 TCCTGAATCTTTGACTTGACGTTGTCAATAGTGTCGGAGGACTCAACCTCGAGGGTAATG 914
Query 132089 GTTTTACCAGTCAGAGTTTT 132108
|| || |||||||| || ||
Sbjct 913 GTCTTGCCAGTCAGGGTCTT 894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476599082160240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |