Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1893 93.3 4e-14 >seq1893 Length=9943 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| ||||| || || || || | || || | || || ||| ||| Sbjct 1106 CATGCAAATTTTTGTCAAAACCTTGACAGGCAAGACAATTACCTTGGAGGTGGAATCCAG 1165 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 |||||||| || | || || |||||| ||||| || ||||| || || ||||| Sbjct 1166 TGATACTATTGACAACGTCAAGTCTAAAATTCAAGATAAGGAAGGTATTCCTCCGGATCA 1225 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 |||| | ||||||| | || || || | ||||||| | | | | | ||||||||||| Sbjct 1226 GCAACGTCTCATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACTCTGAGCGATTACAA 1285 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAAAATGAT 25409 || || || || |||| | ||| | || | | || | ||||| |||||| Sbjct 1286 CATCCAGAAGGAGAGCACCCTGCATCTCGTTCTTCGCCTGCGTGGAGGGCAATGAT 1341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445083083474880