Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 141 1e-27
seq1923 129 8e-24
>seq1793
Length=11804
Score = 141 bits (156), Expect = 1e-27
Identities = 338/506 (67%), Gaps = 25/506 (5%)
Strand=Plus/Plus
Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741
|||||||||| || ||| ||||||| | ||| | ||||||| ||| |||||||
Sbjct 6692 CACAAGGAGGAGCTTGACTCTGCCATAGTCTACGACAGAGACTTCAATTACCAGTACTTT 6751
Query 259742 GGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGC----GCGATATTGTCGTCGA 259797
|| | ||| || || || ||||| | ||| | || | ||||||| |
Sbjct 6752 GGCTTCAAGACTCTGGAGCGATCGTACCTC-CTGAAGCTCAACGGCAAGATTGTCG---A 6807
Query 259798 GCGGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGA 259857
||| |||||| ||||| | ||||||||||| | ||| | |||| |||
Sbjct 6808 GCGACCCCAGCATATGATTATGCGTGTCGCTGTCGGCA--TCTGGGG----------CGA 6855
Query 259858 CAATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCT 259916
||| | |||| ||| | | || ||| | |||||| ||||| ||| ||||||
Sbjct 6856 CAACA---TTGAGCGCGTCATTGAAACGTACAACCTCATGTC-CAGCAAGTTCTTCACCC 6911
Query 259917 CAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTC 259976
|| | || || || || ||||| || || || | | ||| || || ||||| |
Sbjct 6912 ACGCCTCTCCGACCCTTTTCAATGCTGGTACTCCCCAGGCCCAGCTGTCATCCTGCTTCC 6971
Query 259977 TGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGC 260036
| | |||||||||| || ||||||||||||||||||||||||||| |||||
Sbjct 6972 TCGTCGACATGAAGGATGACAGCATCGAGGGCATCTATGACACGCTCAAGACCTGCGCCA 7031
Query 260037 TCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCG 260096
| |||||||| ||| |||||||| || | || ||| | || ||| | |||
Sbjct 7032 TGATCTCCAAAATGGCTGGCGGCATTGGCCTCAACGTCCACCGCATCCGTGCCACTGGCT 7091
Query 260097 CCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTA 260156
| ||| | || ||||||||||| ||||| ||| | | |||||||| || || || |
Sbjct 7092 CATACATTGCTGGCACCAACGGTACTTCCAATGGCGTCATTCCCATGCTCCGAGTGTTCA 7151
Query 260157 ACGACACGGCGCGCTACGTCGACCAG 260182
|| ||||||| | || || ||||||
Sbjct 7152 ACAACACGGCCAGATATGTAGACCAG 7177
Score = 109 bits (120), Expect = 8e-18
Identities = 331/505 (66%), Gaps = 16/505 (3%)
Strand=Plus/Plus
Query 262913 AGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGA 262972
||||||| | |||||||| ||| | | || | ||||||||||||| |||| || ||||
Sbjct 8085 AGCATGGTATCCGCAACTCCTTGTTGCTTGCTCCCATGCCCACGGCCTCGACCTCTCAGA 8144
Query 262973 TCCTGGGCAACACCGAGGCGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTG 263031
|||| ||||||| ||| ||||| | ||| |||| |||||||||| |||||| ||
Sbjct 8145 TCCTCGGCAACAATGAGTGTTTCGA-GCCATACACGTCCAACATCTACCAGCGCCGTGTC 8203
Query 263032 CTCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGC 263091
| | || || || || || |||| || ||||| | |||| | ||
Sbjct 8204 TTGGCTGGGGAGTTCCAGGTCGTGAACCCGTGGCTCCTCAAGGACCTGGTCGACATGGGT 8263
Query 263092 CTGTGGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTT 263151
|||||| | | | | |||| ||||||| | | || || | || | ||
Sbjct 8264 CTGTGGTCCGATGCCATGAAGAACCGCATCATTGCCGAGAACGGATCCATCCAAAACATT 8323
Query 263152 GACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCC 263211
| || | || |||| ||||||| |||| ||||||||| |||||| | |
Sbjct 8324 CCCAAC------ATCCCTGCCGACATCAAGGCGCTCTACAAGACCGTTTGGGAGATTTCG 8377
Query 263212 AACCGGGTGACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCG 263271
| || | || | ||||| |||||||||| ||| | |||||| ||||||
Sbjct 8378 CAGCGTCAGGTTGTTCAGATGGCCGCCGACCGCGGCGCCTTCATTGACCAGTCGCAGTCG 8437
Query 263272 CTCAACCTGTACCTCGCCGACCCGACGGCCGAGAGCATCACGTCGATGCAC---GCCTAT 263328
|| ||| | || | ||||| ||| | | ||||| ||||||||| |||
Sbjct 8438 CTGAACATCCACATGAAAGACCCCACGATGGGCAAAATCACCTCGATGCACTTTGCC--- 8494
Query 263329 GCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAAC 263388
| ||| | || |||||||| ||||||||||| ||||||| | | | || ||| |
Sbjct 8495 GGCTGGAAGCTGGGTCTCAAGACGGGCATGTACTACTTGCGCACGCAGGCTGCCGCC-GC 8553
Query 263389 GCC-ATTCAATTCACCGTCGATCAG 263412
||| || || ||||||||||| |||
Sbjct 8554 GCCGATCCAGTTCACCGTCGACCAG 8578
>seq1923
Length=107003
Score = 129 bits (142), Expect = 8e-24
Identities = 187/259 (72%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| ||| |||||| |||||| | ||||| | | |||| | ||||| ||
Sbjct 7702 ATCATCACCGACGCCGTCACCATCGAGCAGGAGTTCCTGACCGAGGCTTTGCCGTGTGCT 7643
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| ||||||||||||| | | || ||| |||||||||||| || ||||| |||||||
Sbjct 7642 CTACTCGGCATGAACGCTA-CTCTGATGAAGCAGTACATTGAA-TTCGTCGCTGACCGCC 7585
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| || | || |||||| | |||||| ||| |||||||||||| || | |||
Sbjct 7584 TCCTGGTCGCTCTCGGCAAC-GAGAAGGTGTACAAGACGGCCAACCCCTTTGATTTCATG 7526
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
|| ||||| || | |||||||||||||| || ||| || || |||||||||
Sbjct 7525 GAAAACATCTCACTGGGTGGCAAGACCAACTTCTTTGAGAAGCGAGTCGGCGAGTACCAG 7466
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
|||||||| |||| ||||
Sbjct 7465 AAGGCCGGTGTCATGGCCA 7447
Score = 129 bits (142), Expect = 8e-24
Identities = 209/296 (71%), Gaps = 5/296 (2%)
Strand=Plus/Minus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| | |||| ||||||||||||| ||||| ||||| ||| | || |
Sbjct 8388 GATTTGGCAAATGTACAAGAAAG-CCGAGGCCTCCTTCTGGACAGCCGAAGAGATTGATC 8330
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTG--TCGCT-GAGCGACGACGAGCGCCATTTCATCA 1455891
|| || | | | ||| ||| | || || |||||| | ||||||
Sbjct 8329 TCTCAAAGGATCTGCACGATTGGAATAATCGATTGAATGATGACGAGAAATACTTCATCT 8270
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||| |||| || || ||| |||||| || |||||||| ||||||||||| |
Sbjct 8269 CTCACATCCTGGCTTTCTTT-GCCGCCTCTGACGGCATCGTCAACGAGAACCTGGTAGAG 8211
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
|| || | ||||| || | ||||| || || | || |||||||| ||||||
Sbjct 8210 CGATTCAGCGGCGAGGTTCAGGTTCCAGAAGCCCGATGCTTCTACGGGTTTCAGATCATG 8151
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
|| || |||||||||||||| || |||||| | ||||||||||| ||| |||||||
Sbjct 8150 ATGGAGAACATCCACTCTGAGACATACTCGTTGCTGATCGACACATACATCAAGGA 8095
Score = 86.0 bits (94), Expect = 9e-11
Identities = 139/193 (72%), Gaps = 14/193 (7%)
Strand=Plus/Minus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGAT-CA--ACAAGGAGGGCCTCGACACTTTGCCG 1456179
|| ||||| |||||||| || | ||||| || ||||||| || | ||| |||
Sbjct 7963 AAGAAGGCGGACTGGGCTATTCACTGGATTCAGGACAAGGAA----TCCAG-CTTCGCCC 7909
Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238
|||| | |||| ||||||||| || ||||||||||| ||| ||| || | |||
Sbjct 7908 AGCGATTAGTCGCCTTTGCCGCTGTTGAGGGCATCTTCTTCAGCGGCGCCTTTGCCTCCA 7849
Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT--TCTGCTTTAGCAACGAATTTA 1456296
|||||||||| |||||||| ||| | |||||||| || || || | |||||| | |
Sbjct 7848 TCTTTTGGCTGAAGAAGCGGGGCTTGATGCCCGGCCTGACCTTCTCT---AACGAACTCA 7792
Query 1456297 TCAGTCGCGACGA 1456309
|| ||||||||
Sbjct 7791 TCTCGCGCGACGA 7779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177615016961508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |