Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq1745 114 1e-20
seq1479 105 6e-18
seq1893 104 2e-17
>seq1745
Length=53961
Score = 114 bits (126), Expect = 1e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583
|| |||||| || | || |||||||| ||||||||||| ||| || ||| || | ||
Sbjct 17018 CAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATC 17077
Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643
|| ||||| || || ||||| || | |||||||| |||| || | | ||||||||
Sbjct 17078 CTCGAGCTGTTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGGGATTCCTTCCTTGTC 17137
Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703
| ||||| ||| | | | | | |||||| || |||||||| | ||||||||
Sbjct 17138 CTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATCGT 17197
Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| ||||||| ||||| || || ||||||||
Sbjct 17198 CTTCCCCGTCAGGGTTTTGACGAAGATCTGCAT 17230
>seq1479
Length=130260
Score = 105 bits (116), Expect = 6e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
||||||| || ||||| |||| || |||||| | || || || ||||| || || || |
Sbjct 49445 CCTTTTGGATATTGTAGTCGGACAGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCGAAAA 49504
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
|||| ||||||||||| | ||||| | |||||||||| ||| || ||| | | |
Sbjct 49505 TCAATCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATTTTAGACTTGACATTGT 49564
Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAA 35726
| | ||||| || || ||||| | ||||| ||||||||||||| || ||||| |
Sbjct 49565 CGATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTTTTACCCGTCAGCGTCTTCACGA 49624
Query 35727 A 35727
|
Sbjct 49625 A 49625
>seq1893
Length=9943
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| || | | || || | ||| | |||| ||||| || |||||||| |||| |
Sbjct 802 CCACCCCGAAGACGCAGGACGAGATGCAGCGTAGATTCCTTCTGGATGTTGTAGTCGGAC 743
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || || || ||||| || || || |||| ||||||||||||| |||
Sbjct 742 AGAGTACGGCCATCTTCGAGTTGCTTGCCAGCGAAAATCAGTCGCTGCTGGTCCGGAGGG 683
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689
| || |||||||||| |||||| ||| | | | | | |||||| || || |||
Sbjct 682 ATGCCCTCCTTGTCCTGAATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGACC 623
Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| | ||||| || || || || | || ||||| || ||||||||
Sbjct 622 TCAAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACGAAAATCTGCAT 576
Score = 102 bits (112), Expect = 7e-17
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599
|| |||||||| || |||||||||||| || || || | || |||| |||||| ||
Sbjct 1303 GTGCTCTCCTTCTGGATGTTGTAATCGCTCAGAGTGCGACCATCTTCCAACTGCTTTCCA 1244
Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTT 35658
||||| || | || ||||| |||| ||||| | ||||| | | ||| ||| | |||
Sbjct 1243 GCAAAAATGAGACGTTGCTGATCCGGAGGAATACCTTCCTTAT-CTTGAATTTTAGACTT 1185
Query 35659 CAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAG 35717
| |||| | | || || || ||||||||||||| || || || || || ||||| |
Sbjct 1184 GA-CGTTGTCAATAGTATCACTGGATTCCACCTCCAAGGTAATTGTCTTGCCTGTCAAGG 1126
Query 35718 TTTTCACAAATATCTGCAT 35736
|||| ||||| || |||||
Sbjct 1125 TTTTGACAAAAATTTGCAT 1107
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
||||| || | | |||||||||||| | || ||||||||||||||||| ||||
Sbjct 1105 CCACCTCGGAGACGCAACACCAAATGAAGTGTTGATTCCTTTTGAATGTTGTAGTCGGAG 1046
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| ||| | || || || ||||| || || || |||| || |||||||||| |||
Sbjct 1045 AGGGTGCGCCCATCTTCAAGTTGCTTGCCAGCGAAAATCAGACGTTGCTGGTCCGGAGGG 986
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| | ||||| ||| |||||| ||| | |||| | | |||||| || || ||
Sbjct 985 ATCCCTTCCTTATCCTGAATCTTTGACTTGA-CGTTGTCAATAGTGTCGGAGGACTCAAC 927
Query 35689 CTCCACCGTGATCGTTTTACCCGTCA 35714
||| | || || || || || ||||
Sbjct 926 CTCGAGGGTAATGGTCTTGCCAGTCA 901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450782138572720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |