Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 183 4e-41
>seq1793
Length=11804
Score = 183 bits (202), Expect = 4e-41
Identities = 725/1128 (64%), Gaps = 32/1128 (3%)
Strand=Plus/Minus
Query 69103 CCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTC-AGCTTCTGGAAT 69161
|||||||| || | |||||| ||||| || | | | || | || | ||| || | |
Sbjct 7836 CCCTGAACACCGACACCGATGGGTCTGTGGCGCATGTT-GCTGTTGCGAGCCTCCTGCAC 7778
Query 69162 AGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTC 69221
|| |||| || | || || || || || || || ||||| || || | | ||||||
Sbjct 7777 GGGGTAATGGTTGACGTCGATGATCTTGTTTAGGTTGCGGACCACGACCTGAGTCACGTC 7718
Query 69222 CTTTAGTTTGAGAAAATCAAATCGTCCATCTAT------AACAAACATATTCAGTGCTAC 69275
| || || |||| ||| |||| | || | |||||| | || || |
Sbjct 7717 ATGCAGCTTCTGAAAGTCATATCGAGCCTCGTTGTAGTCAACAAAGGCAGGAAGGGCGAG 7658
Query 69276 AGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACA 69335
|| || || || || || || ||||| | | | |||| || ||||| || ||
Sbjct 7657 CGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCA 7598
Query 69336 TAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTC 69395
|||||| || | |||| || || || || | ||| || ||||| ||||| || || ||
Sbjct 7597 GAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 7538
Query 69396 CTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAAC 69455
|||||| || || || || | || || ||| |||||| ||| | ||| || | ||| |
Sbjct 7537 CTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGAG 7478
Query 69456 GACCCTAGCATTTATTACGGTCTTGTAACGCTT---CTCTTTTTCATATTGT--GTATAT 69510
| || || ||||||| || ||| ||| || || | | ||| |
Sbjct 7477 CTTCTGGGCGCGGAT---GGTCTTGCGACCCTTGCCCTCACGCTCGTACTTTTCGTACAG 7421
Query 69511 AGCCGTTCGAATTCATCTCCCCAAA-CA-TCATCCAATCCAGGACATTCATTTGGACACA 69568
|||| || || || ||| ||| | || || | | || || || ||||| |||||||
Sbjct 7420 AGCC--TCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACA 7365
Query 69569 TCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAG 69628
| | | ||| | | | | || || || ||||| || ||||| || ||||| || |
Sbjct 7364 TGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGG 7305
Query 69629 CTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAA 69688
| | || || || | | | | || || || || || || || ||||| |
Sbjct 7304 CGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGA 7245
Query 69689 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTAT 69748
|||| | | ||||| ||||| || || || || || || | | | || ||||| || |
Sbjct 7244 ACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCACCTGGTCGCTTGT 7185
Query 69749 TTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATAC 69808
| || ||||| |||| |||||||| ||||| || | |||| ||||| ||||| | |
Sbjct 7184 TGCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGC 7125
Query 69809 CATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAG 69868
|||| || |||| || || |||| ||| || || | || || || |
Sbjct 7124 CATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTGGACGT 7065
Query 69869 ATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATA 69928
|| || || || || |||||||| ||||| | || || || | |||||||| |
Sbjct 7064 TGAGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGA 7005
Query 69929 TACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTA 69988
| ||||| ||||| ||||| |||||| | || || ||| |||| || ||
Sbjct 7004 TGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTGGGCCTGGG 6945
Query 69989 TAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGAT 70048
||| || ||||| || | || ||||| ||||| ||||| | || || | || |
Sbjct 6944 GAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGT 6885
Query 70049 TGTATGTTTCAATA----GCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACG 70103
|||| |||||||| ||| | | | | || || | |||| || | ||||||||
Sbjct 6884 TGTACGTTTCAATGACGCGCTCAATGT-TGTCGCCCCAGATG----CCGACAGCGACACG 6830
Query 70104 CATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTT 70163
||| | ||||||||| ||||| || || | || || | |||| ||||| |||
Sbjct 6829 CATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTACGATCG 6770
Query 70164 TTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 70211
|||||||| || || ||||| || | ||| |||||||| |||||
Sbjct 6769 CTCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTCTCTGTCGTA 6722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686891335343760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |