Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1793 183 4e-41 >seq1793 Length=11804 Score = 183 bits (202), Expect = 4e-41 Identities = 725/1128 (64%), Gaps = 32/1128 (3%) Strand=Plus/Minus Query 69103 CCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGAACTTTC-AGCTTCTGGAAT 69161 |||||||| || | |||||| ||||| || | | | || | || | ||| || | | Sbjct 7836 CCCTGAACACCGACACCGATGGGTCTGTGGCGCATGTT-GCTGTTGCGAGCCTCCTGCAC 7778 Query 69162 AGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTC 69221 || |||| || | || || || || || || || ||||| || || | | |||||| Sbjct 7777 GGGGTAATGGTTGACGTCGATGATCTTGTTTAGGTTGCGGACCACGACCTGAGTCACGTC 7718 Query 69222 CTTTAGTTTGAGAAAATCAAATCGTCCATCTAT------AACAAACATATTCAGTGCTAC 69275 | || || |||| ||| |||| | || | |||||| | || || | Sbjct 7717 ATGCAGCTTCTGAAAGTCATATCGAGCCTCGTTGTAGTCAACAAAGGCAGGAAGGGCGAG 7658 Query 69276 AGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACA 69335 || || || || || || || ||||| | | | |||| || ||||| || || Sbjct 7657 CGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCA 7598 Query 69336 TAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTC 69395 |||||| || | |||| || || || || | ||| || ||||| ||||| || || || Sbjct 7597 GAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 7538 Query 69396 CTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAAC 69455 |||||| || || || || | || || ||| |||||| ||| | ||| || | ||| | Sbjct 7537 CTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGAG 7478 Query 69456 GACCCTAGCATTTATTACGGTCTTGTAACGCTT---CTCTTTTTCATATTGT--GTATAT 69510 | || || ||||||| || ||| ||| || || | | ||| | Sbjct 7477 CTTCTGGGCGCGGAT---GGTCTTGCGACCCTTGCCCTCACGCTCGTACTTTTCGTACAG 7421 Query 69511 AGCCGTTCGAATTCATCTCCCCAAA-CA-TCATCCAATCCAGGACATTCATTTGGACACA 69568 |||| || || || ||| ||| | || || | | || || || ||||| ||||||| Sbjct 7420 AGCC--TCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACA 7365 Query 69569 TCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAG 69628 | | | ||| | | | | || || || ||||| || ||||| || ||||| || | Sbjct 7364 TGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGG 7305 Query 69629 CTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAA 69688 | | || || || | | | | || || || || || || || ||||| | Sbjct 7304 CGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGA 7245 Query 69689 ACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTAT 69748 |||| | | ||||| ||||| || || || || || || | | | || ||||| || | Sbjct 7244 ACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCACCTGGTCGCTTGT 7185 Query 69749 TTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATAC 69808 | || ||||| |||| |||||||| ||||| || | |||| ||||| ||||| | | Sbjct 7184 TGCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGC 7125 Query 69809 CATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAG 69868 |||| || |||| || || |||| ||| || || | || || || | Sbjct 7124 CATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTGGACGT 7065 Query 69869 ATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATA 69928 || || || || || |||||||| ||||| | || || || | |||||||| | Sbjct 7064 TGAGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGA 7005 Query 69929 TACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTA 69988 | ||||| ||||| ||||| |||||| | || || ||| |||| || || Sbjct 7004 TGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTGGGCCTGGG 6945 Query 69989 TAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGAT 70048 ||| || ||||| || | || ||||| ||||| ||||| | || || | || | Sbjct 6944 GAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGT 6885 Query 70049 TGTATGTTTCAATA----GCTGATTCTATATC-CCACTGATGAATTCCTATCGCGACACG 70103 |||| |||||||| ||| | | | | || || | |||| || | |||||||| Sbjct 6884 TGTACGTTTCAATGACGCGCTCAATGT-TGTCGCCCCAGATG----CCGACAGCGACACG 6830 Query 70104 CATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTT 70163 ||| | ||||||||| ||||| || || | || || | |||| ||||| ||| Sbjct 6829 CATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTACGATCG 6770 Query 70164 TTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 70211 |||||||| || || ||||| || | ||| |||||||| ||||| Sbjct 6769 CTCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTCTCTGTCGTA 6722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686891335343760