Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1923 82.4 6e-11
>seq1923
Length=107003
Score = 82.4 bits (90), Expect = 6e-11
Identities = 231/344 (67%), Gaps = 18/344 (5%)
Strand=Plus/Minus
Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789
|| |||||||||||||| ||||| |||| || || |||||||| ||||| ||||| |
Sbjct 8387 ATTTGGCAAATGTACAAGAAAGCCGAGGCCTCCTTCTGGACAGCCGAAGAGATTGATCTC 8328
Query 43790 ACTAAAGACTTAGCAC-ATTGG---ATTGCATTAAA--ACCACAAGAAAAACATTTTATA 43843
| |||| | |||| ||||| | | ||| || | || ||||| || || ||
Sbjct 8327 TC-AAAGGATCTGCACGATTGGAATAATCGATTGAATGATGACGAGAAATAC--TTCATC 8271
Query 43844 TCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGT 43903
||| | |||| || ||||| || ||||| || ||||| || || ||||
Sbjct 8270 TCTCACATCCTGGCTTTCTTTGCCGCCTCTGACGGCATCGTCAACGAGAACCTGGTAGAG 8211
Query 43904 CGGTT-TGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962
|| || ||| || ||||| | |||||||| ||||| || || |||||||| ||
Sbjct 8210 CGATTCAGCG-GCGAGGTTCAGGTTCCAGAAGCCCGATGCTTCTACGGGTTTCAGATCAT 8152
Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGG 44022
|| || || || || || || | ||| | ||||| || || |||||||| ||
Sbjct 8151 GATGGAGAACATCCACTCTGAGACATACTCGTTGCTGATCGACACATACATCAAGGA--- 8095
Query 44023 GCACGAGAAGC---ATCGATTGTTTAATGCGATAGA-AACAGTA 44062
||||| ||| || ||||| ||||| || || | |||||
Sbjct 8094 GCACGCCCAGCGTAATTACTTGTTCAATGCCATCGAGACCAGTA 8051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397446147314170
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |