Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq1745 100 2e-16 >seq1745 Length=53961 Score = 100 bits (110), Expect = 2e-16 Identities = 164/236 (69%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 27015 TTATTGCCTCC---GCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTG 27071 || |||||||| ||||| |||| ||||| || | || || || ||||| ||| Sbjct 16995 TTCTTGCCTCCCCCGCGCAGTCGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTG 17054 Query 27072 TAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGA 27131 |||||||||| | |||| | || ||||||||||| || || | ||||| ||||| ||| Sbjct 17055 TAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAAGATGAGTCGCTGCTGA 17114 Query 27132 TCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTG 27191 ||||| || | || || || || |||||| || | | || | ||||| | Sbjct 17115 TCCGGGGGGATTCCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAA 17174 Query 27192 GCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || || || | || |||||||| ||||| || ||||| ||||| Sbjct 17175 GACTCCACCTCGAGGGTGATCGTCTTCCCCGTCAGGGTTTTGACGAAGATCTGCAT 17230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424923866141808