Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 309 4e-79
seq1923 93.3 5e-14
>seq1793
Length=11804
Score = 309 bits (342), Expect = 4e-79
Identities = 1129/1740 (65%), Gaps = 47/1740 (3%)
Strand=Plus/Minus
Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTG 110428
|||||||| || |||||||| || | ||||| || | ||||| || | || |||
Sbjct 8529 TAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATCGAGGTGATTTTG 8470
Query 110429 GACATCGTTGGACTTTCCATGAAGAGGTTCAT--ACTTTGACTTTGGTCAATGAAG-CGC 110485
|||||| || || |||| || ||||| ||| |||| ||||||||||| |||
Sbjct 8469 CCCATCGTGGGGTCTTTCATGTGGATGTTCAGCGACTGCGACT--GGTCAATGAAGGCGC 8412
Query 110486 CCCCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAATTTCCCAAACTGTGCGATAG 110545
| | || | || ||||| | || || | | | ||| |||||||| || |||
Sbjct 8411 CGCGGTCG-GCGGCCATCTGAACAACCTGACGCTGCGAAATCTCCCAAACGGTCTTGTAG 8353
Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605
|| |||||| || | ||||| | | || || |||||||| || | | |
Sbjct 8352 AGCGCCTTGATGTCGGCAGGGATGTTGGGAATGTTTTGGATGGATCCGTTCTCGGCAATG 8293
Query 110606 ATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGC 110665
||| | | |||||| | | |||||| ||||| || | ||||| |||| ||| |
Sbjct 8292 ATGCGGTTCTTCATGGCATCGGACCACAGACCCATGTCGACCAGGTCCTTGAGGAGCCAC 8233
Query 110666 TTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTAT 110725
||| || | ||||| || || | | | | | |||||||||| | ||||||
Sbjct 8232 GGGTTCACGACCTGGAACTCCCCAGCCAAGACACGGCGCTGGTAGATGTTGGACGTGTAT 8173
Query 110726 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 110785
|| || || || ||||| || || | ||| || | ||| ||||| || ||||| || ||
Sbjct 8172 GGCTCGAAACACTCATTGTTGCCGAGGATCTGAGAGGTCGAGGCCGTGGGCATGGGAGCA 8113
Query 110786 ATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG 110845
| ||| | ||| || | ||| | ||||||||| | ||||| ||| ||||| ||
Sbjct 8112 AGCAACAAGGAGTTGCGGATACCATGCTCCTTGATTTGCTCCTTCAGATTGTCCCATTCC 8053
Query 110846 TA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGG 110903
| ||| || || || || |||| ||||||||||||| || | || | || || |
Sbjct 8052 CACAGTTCAGAA-GGCTTGACGTTCC-ACATGTCAAACTGGAGAATACCCTCCGAGGCAG 7995
Query 110904 GAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCA 110963
| || || |||||||| ||| | ||| || | | || | || | ||| ||
Sbjct 7994 GTGATCCTTCAAAGGTGGAATAAGGACCCTGCTCCTTGGCAAGCTCCATGGACGCAGTCA 7935
Query 110964 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 111023
||| ||||| || | ||| || || || | |||| ||| || || ||| |
Sbjct 7934 AGGAGGCGTGGTAGACGGTCTCGAAAATCTGCTTGTTCAACTCACGAGCCTCGGGTGACT 7875
Query 111024 CAAATGCGTAG-CGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATA 111082
|||| | | || ||| | || | || || ||||| |||||||| | ||| ||
Sbjct 7874 CAAA-GGGCAGACGGAGAGCGAGGAAGGCGTCGGCAAGACCCTGAACACCGACACCGATG 7816
Query 111083 GGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATG 111142
|||||||| ||||| || || || || || ||||| ||| || ||| |||
Sbjct 7815 GGTCTGTGGCGCATGTTGCTGTTGCGAGCCTCCTGCACGGGGTAATGGTTGACGTCGATG 7756
Query 111143 ACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAA 111202
| |||||| || | || | || || | ||||| || || | | | ||| |
Sbjct 7755 ATCTTGTTTAGGTTGCGGACCACGACCTGAGTCACGTCATGCAGCTTCTGAAAGTCATA- 7697
Query 111203 GTGCGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACA 111259
|||| ||| | | | ||| | |||||||||| || || | ||||| ||
Sbjct 7696 --TCGAGCCTCGTTGTAGTCAACAAAGGCAGGAAGGGCGAGCGAAGCAAGGTTGCAGACG 7639
Query 111260 GCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATC 111319
||| ||| ||| | | ||| || | ||| || || || | || ||||| | ||
Sbjct 7638 GCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAGAGATTAGAACTTCTGATG 7579
Query 111320 GTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGC 111379
|| || | ||||| ||||| |||||||||||||| |||||||||||||||||| ||||
Sbjct 7578 GTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGG 7519
Query 111380 GTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAAT 111438
| || ||||| ||||| | || | ||| | | ||| | | || | ||| | ||
Sbjct 7518 TTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGAGCTTCTG-GGCGCG---GAT 7463
Query 111439 GGCGTTG-GCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 111495
|| ||| | || | ||||| |||||||||| ||| || || |||||||||||| |
Sbjct 7462 GGTCTTGCGACCCTTGCCCTCACGCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCA-C 7404
Query 111496 CACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTT 111554
|| || ||||| || || || || | ||||| | |||| ||| | || |
Sbjct 7403 CATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACATGAGAGTCCAGTCGCCGTTCT 7344
Query 111555 CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG--GATGAAAAGAGATCTCTACA 111612
||| || ||||||||||| || || || ||||||||| || |||| || || |
Sbjct 7343 TCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGGCGAGGAAA--AGGTCCCGCGC 7286
Query 111613 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 111672
||| |||| || | || ||||| |||| || |||||||| | || ||| |||||
Sbjct 7285 GCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAACTCAAAGACATCAGCGTG 7226
Query 111673 CCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTAC 111726
||| ||||| || |||| || | | || | | ||| ||| | || | |||
Sbjct 7225 CCAAGGCTCCAGGTAGATGGCAAAGGCACC---TGGTCGCTTGTTGCCACCCTGGTCTAC 7169
Query 111727 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATT 111786
||| | || ||| ||| || || || ||||| ||||| | |||| || ||| ||
Sbjct 7168 ATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGCCATTGGAAGTACCGTT 7109
Query 111787 TGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 111846
|| || ||| || | |||| | | |||| || | ||||| || ||
Sbjct 7108 GGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCGCC 7049
Query 111847 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 111906
|||| || ||||| || || | | || || ||||||| || | ||| |||
Sbjct 7048 AGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCGATGCTGTC 6989
Query 111907 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGA 111965
||||| || ||| |||||||| |||| ||| || || || |||||||||||||
Sbjct 6988 ATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTG-GGCCTGGGGAGTACCAGCATTGA 6930
Query 111966 AGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAA 112023
| ||||| || | ||||| ||| | | |||| |||||| || ||| || || |
Sbjct 6929 AAAGGGTCGGAGAGGCGTGGGTGA--AGAACTTGCTGGACATGAGGTTGTACGTTTCAAT 6872
Query 112024 GACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
||| ||||||| || || |||||||| ||||| ||||| | ||| | ||| ||
Sbjct 6871 GACGCGCTCAATGTTGTCGCCCCAGATGCCGACAGCGACACGCATAATCATATGCTGGGG 6812
>seq1923
Length=107003
Score = 93.3 bits (102), Expect = 5e-14
Identities = 156/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| || ||| |||||||| || || || || ||||| || |||||| || ||
Sbjct 7757 GGCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGTTCGTTAGAGAAGGTCAGGCC 7816
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
||||| | ||||||||||||| |||| | || | | || | ||| |||||||||
Sbjct 7817 GGGCATCAAGCCCCGCTTCTTCAGCCAAAAGATGGAGGCAAAGGCGCCGCTGAAGAAGAT 7876
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAA 122836
||||| ||| ||||| || | | || | ||||||| | || | ||| | | ||
Sbjct 7877 GCCCTCAACAGCGGCAAAGGCGACTAATCGCTGGGCGAAGCTG-GATTCCTTGTCCTGAA 7935
Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTAC 122879
||| | || ||||| | ||||||||| |||||| || ||
Sbjct 7936 TCCAGTGAATAGCCCAGTCCGCCTTCTTGCGAATACAGGGAAC 7978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628016032286400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |