Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1793 289 4e-73 seq1923 95.1 1e-14 >seq1793 Length=11804 Score = 289 bits (320), Expect = 4e-73 Identities = 1155/1803 (64%), Gaps = 39/1803 (2%) Strand=Plus/Minus Query 117842 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 117901 ||||||||| ||||||||||| ||| |||||||| | | ||||| |||| | || Sbjct 8530 GTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATCGAGGTGATTTT 8471 Query 117902 GGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 117961 | | || || || |||| || ||||| || || || || |||||| || Sbjct 8470 GCCCATCGTGGGGTCTTTCATGTGGATGTTCAGCGACTGCGACTGGTCAATGAAGGCGCC 8411 Query 117962 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAG 118021 || || || ||||| | || || | | | || ||||| || ||| ||||||| Sbjct 8410 GCGGTCGGCGGCCATCTGAACAACCTGACGCTGCGAAATCTCCCAAACGGTCTTGTAGAG 8351 Query 118022 GTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCAT 118081 ||| || || | ||||| | || |||||||||||||| | | | || Sbjct 8350 CGCCTTGATGTCGGCAGGGATGTTGGGAATGTTTTGGATGGATCCGTTCTCGGCAATGAT 8291 Query 118082 GAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTT 118141 | | | |||||| | | ||||| ||||| || | || |||| | ||| | Sbjct 8290 GCGGTTCTTCATGGCATCGGACCACAGACCCATGTCGACCAGGTCCTTGAGGAGCCACGG 8231 Query 118142 ATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGG 118201 || || || ||||| || || | | || | | | ||||| |||| ||||||||| Sbjct 8230 GTTCACGACCTGGAACTCCCCAGCCAAGACACGGCGCTGGTAGATGTTGGACGTGTATGG 8171 Query 118202 CTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCAT 118261 ||| || ||||||||||| || | ||| || | || ||||| ||||||||||| || | Sbjct 8170 CTCGAAACACTCATTGTTGCCGAGGATCTGAGAGGTCGAGGCCGTGGGCATGGGAGCAAG 8111 Query 118262 GAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGT--CG 118319 | | | ||| |||| ||| | ||| | || | ||||| ||| |||||| | | Sbjct 8110 CAACAAGGAGTTGCGGATACCATGCTCCTTGATTTGCTCCTTCAGATTGTCCCATTCCCA 8051 Query 118320 TAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGC 118379 |||| || | || | | |||||| ||||||||||| ||||| | || || || Sbjct 8050 CAGTTCAG--AAGGCTTGACGTTCCACATGTCAAACTGGAGAATACCCTCCGAGGCAGGT 7993 Query 118380 GATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGG 118439 ||||| ||||| || ||| || |||| ||| || | || | ||| | | Sbjct 7992 GATCCTTCAAAGGTGGAATAAGGACCCTGCTCCTTGGCAAGCTCCATGGACGCAGTCAAG 7933 Query 118440 GCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCA 118499 | ||||| || | || || ||||| | |||| | |||||| || ||| Sbjct 7932 GAGGCGTGGTAGACGGTCTCGAAAATCTGCTTGTTCAACTCACGAGCCTCGGGTGACTCA 7873 Query 118500 AACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGG 118559 || | || ||| | || | || || ||||| || ||||||| || || || Sbjct 7872 AAGGGCAGACGGAGAGCGAGGAAGGCGTCGGCAAGACCCTGAACACCGACACCGATGGGT 7813 Query 118560 CGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACC 118619 | || | ||| || || ||||| || |||||| ||| || ||||| | | Sbjct 7812 CTGTGGCGCATGTTGCTGTTGCGAGCCTCCTGCACGGGGTAATGGTTGACGTCGATGATC 7753 Query 118620 CTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTG 118679 | ||||| || | || |||| || | ||||| ||||| | | ||| | Sbjct 7752 TTGTTTAGGTTGCGGACCACGACCTGAGTCACGTCATGCAGCTTCTGAAAGTCATA---T 7696 Query 118680 CGAGTCTCTTCATTG---ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAG 118736 |||| ||| | | | ||| | ||||||||||| || || || || || || | Sbjct 7695 CGAGCCTCGTTGTAGTCAACAAAGGCAGGAAGGGCGAGCGAAGCAAGGTTGCAGACGGCC 7636 Query 118737 GTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTG 118796 ||| ||| | | ||| || ||||| |||||||| | || ||||| | ||||| Sbjct 7635 ACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAGAGATTAGAACTTCTGATGGTT 7576 Query 118797 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTC 118856 || | |||||| || || ||| |||| || ||||||||||| |||||| | || | Sbjct 7575 CCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTG 7516 Query 118857 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAG-TGG 118914 || ||||| || || | | | ||| | | ||||| | || | ||| | | ||| Sbjct 7515 CCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGAGCTTCTG-----GGCGCGGATGG 7461 Query 118915 CGTTGGCTCGC---CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCA 118971 ||| | | ||||| |||||||||| ||| || || |||||||| ||||| Sbjct 7460 TCTTGCGACCCTTGCCCTCACGCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCACCAT 7401 Query 118972 CGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCT 119031 | || | || || || || || || || | ||||| ||| | || || || Sbjct 7400 AGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACATGAGAGTCCAGTCGCCGTTCTTCT 7341 Query 119032 CAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAG 119091 | || |||||||||||||| || |||||||| || || ||| || ||||| |||| Sbjct 7340 CGACACGCTTCATGAAGAGATCAGGGATCCACAGGGCGAGGAAAAGGTCCCGCGCGCGAA 7281 Query 119092 CTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACG 119151 | || || | || || || ||| | || | || || | || ||| |||||||| | Sbjct 7280 CCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAACTCAAAGACATCAGCGTGCCAAG 7221 Query 119152 GTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACC 119205 | |||||||| | || | | | ||| | || ||| |||||| |||||| | Sbjct 7220 GCTCCAGGTAGATGGC-AAAGGCACCT--GGTCGCTTGTTGCCACCCTGGTCTACATATC 7164 Query 119206 TCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCC 119265 | || ||| ||| || || || ||||| ||||||| |||| ||| || || || | Sbjct 7163 TGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGCCATTGGAAGTACCGTTGGTGC 7104 Query 119266 CCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGC 119323 | || || ||| | | |||| | || ||||| || | ||||| || || || Sbjct 7103 CAGCAATGTATGAGCC--AGTGGCACGGATGCGGTGGACGTTGAGGCCAATGCCGCCAGC 7046 Query 119324 CCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACC 119383 | || ||||| ||||| | |||| || | ||||| || ||||| |||| | Sbjct 7045 CATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCGATGCTGTCATC 6986 Query 119384 CTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCT-GGGTGTACCAGCGTTGAAGA 119442 ||| | ||| |||||||||| |||| || ||||| ||| |||||||| ||||| | Sbjct 6985 CTTCATGTCGACGAGGAAGCAGGATGACAGCTG-GGCCTGGGGAGTACCAGCATTGAAAA 6927 Query 119443 GAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGAC 119500 | || || | |||||| ||| | | |||| |||||| || ||| || || | ||| Sbjct 6926 GGGTCGGAGAGGCGTGGGTGA--AGAACTTGCTGGACATGAGGTTGTACGTTTCAATGAC 6869 Query 119501 GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGT 119560 | ||||| || || || |||| | ||| ||||||| ||| | |||||| Sbjct 6868 GCGCTCAATGTTGTCGCCCCAGATGCCGACAGCGACACGCATAATCATATGCTGGGGTCG 6809 Query 119561 TTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAA 119620 || | | | || | |||| || ||||||| ||||| ||||||| ||||| Sbjct 6808 CTCGACAATCTTGCCGTTGAGCTTCAGGAGGTACGATCGCTCCAGAGTCTTGAAGCCAAA 6749 Query 119621 ATA 119623 || Sbjct 6748 GTA 6746 >seq1923 Length=107003 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| || ||| ||||||||||| || ||||||||||| || |||||| ||| || Sbjct 7757 GGCAAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGTTCGTTAGAGAAGGTCAGGCC 7816 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| | ||||||||||||| ||| || || | ||| | ||| ||||||||| Sbjct 7817 GGGCATCAAGCCCCGCTTCTTCAGCCAAAAGATGGAGGCAAAGGCGCCGCTGAAGAAGAT 7876 Query 130135 CCCCTCCACA 130144 ||||| ||| Sbjct 7877 GCCCTCAACA 7886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618419476285040