Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 233 2e-56
seq1259 84.2 3e-11
>seq1793
Length=11804
Score = 233 bits (258), Expect = 2e-56
Identities = 1114/1747 (64%), Gaps = 59/1747 (3%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| | ||| | ||||| || || |||| || || || ||||||| |||
Sbjct 6812 CCCCAGCATATGATTATGCGTGTCGCTGTCGGCATCTGGGGCGACAACATTGAGCGCGTC 6871
Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339
| || || ||| || |||||| |||| | | ||| ||||| | || ||||| |
Sbjct 6872 ATTGAAACGTACAACCTCATGTCCAGCAAGTTCT--TCACCCACGCCTCTCCGACCCTTT 6929
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
||||||||||||| || |||| |||| |||||||| ||| || ||||| |
Sbjct 6930 TCAATGCTGGTACTCCCCAGGCCCAGCTGTCATCCTGCTTCCTCGTCGACATGAAGGATG 6989
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
|| ||| | || ||||||| || || | | || || ||||| || |||||
Sbjct 6990 ACAGCATCGAGGGCATCTATGACACGCTCAAGACCTGCGCCATGATCTCCAAAATGGCTG 7049
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| || ||||| | || |||| | | |||| | || ||| || || |
Sbjct 7050 GCGGCATTGGCCTCAACGTCCACCGCATCCGTGCCACTGGCTCATACATTGCTGGCACCA 7109
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| ||| || |||| | ||||| ||||| || || || ||| ||| || | ||||
Sbjct 7110 ACGGTACTTCCAATGGCGTCATTCCCATGCTCCGAGTGTTCAACAACACGGCCAGATATG 7169
Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
|| | || | ||| ||| | | || | | || |||| || ||||| ||||
Sbjct 7170 TAGACCAGGGTGGCAACAAGCGACCA---GGTGCCTTTGCCATCTACCTGGAGCCTTGGC 7226
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
|||| ||| || | |||||||| || | ||| ||||| || | ||||||| ||
Sbjct 7227 ACGCTGATGTCTTTGAGTTCCTCGACCTACGTAAGAACCACGGCAAGGAGGAGGTTCGCG 7286
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
|| || || ||| ||| || ||||| || ||||||||||||||| | || ||| |||
Sbjct 7287 CGCGGGACCTTTTCCTCGCCCTGTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGA 7346
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGT 104812
||| | ||| ||||| | ||||| | || || || || |||| ||| | |||
Sbjct 7347 ACGGCGACTGGACTCTCATGTGTCCCAATGAGTGCCCCGGCCTTGCCGACTGCTAT-GGT 7405
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAG---GAAG---AAGGTCGGGCGACTGCG 104866
||||||||||| || || ||| |||||||||| || | | ||||| ||| |
Sbjct 7406 GAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGCGTGAGGGCAAGGGTCGCAAGAC--CA 7463
Query 104867 ACGGTG-CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 104925
| | | |||| || | ||| | | ||| | | |||| || ||||| || |
Sbjct 7464 TCCGCGCCCAGAAGC-----TCTGGTACTCCATTTTGGAAGCTCAGACTGAGACCGGCAA 7518
Query 104926 ACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 104985
|| | |||||| ||||| || || || ||| | ||||| || || ||||| | ||
Sbjct 7519 CCCCTTCATGCTCTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTAGGAAC 7578
Query 104986 GATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 105045
|||| ||||| |||||||| || || || | |||| | | | || ||| |||
Sbjct 7579 CATCAGAAGTTCTAATCTCTGCACGGAGATTATCGAATACTCCGCCCCGGACGAGGTGGC 7638
Query 105046 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG--ACA 105103
|| || ||||| || || |||| || || | ||| || | | | || | | |
Sbjct 7639 CGTCTGCAACCTTGCTTCGCTCGCCCTTCCTGCCTTTGTTGA-CTACA-ACGAGGCTCGA 7696
Query 105104 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163
| ||| | | | || || || || || || | || | |||||||||| |
Sbjct 7697 TATGACTTTCAGAAGCTGCATGACGTGACTCAGGTCGTGGTCCGCAACCTAAACAAGATC 7756
Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCA 105223
|| || || ||||||||| || ||||| || || ||| | ||| | ||
Sbjct 7757 ATCGACGTCAACCATTACCCCGTGCAGGAGGCTCGCAACAGCAACATGCGCCACAGACCC 7816
Query 105224 ATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTT 105280
|| ||| |||||||||||||||| || || | ||| | ||| ||| | | |||
Sbjct 7817 ATCGGTGTCGGTGTTCAGGGTCTTGCCGACGCCTTCCTCGCTCTCCGTCTGC---CCTTT 7873
Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340
|| || ||| || || | || || || || |||||| | || |||||| |
Sbjct 7874 GAGTCACCCGAGGCTCGTGAGTTGAACAAGCAGATTTTCGAGACCGTCTACCACGCCTC- 7932
Query 105341 CTTGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTT 105398
||||| | || || ||| | || ||| | ||||| ||| |||||||| || |
Sbjct 7933 CTTGA-CTGCGTCCATGGAGCTTGCCAAGGAGCAGGGTCCTTATTCCACCTTTGAAGGAT 7991
Query 105399 CTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG-CTTC-- 105455
| || || || | || | || || ||||| |||| |||| || |||| ||||
Sbjct 7992 CACCTGCCTCGGAGGGTATTCTCCAGTTTGACATGT-GGAACGT-----CAAGCCTTCTG 8045
Query 105456 -AC--TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTC 105512
|| | || ||||| ||| ||||| | ||||||||| | ||| | || |||
Sbjct 8046 AACTGTGGGAATGGGACAATCTGAAGGAGCAAATCAAGGAGCATGGTATCCGCAACTCCT 8105
Query 105513 TCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCT 105572
| | | ||||| ||||| || ||||| ||| | || ||| | || || ||||| || |
Sbjct 8106 TGTTGCTTGCTCCCATGCCCACGGCCTCGACCTCTCAGATCCTCGGCAACAATGAGTGTT 8165
Query 105573 TTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTG 105632
| || || |||||| | |||||||| | | | | | | || || ||||| | | |
Sbjct 8166 TCGAGCCATACACGTCCAACATCTACCAGCGCCGTGTCTTGGCTGGGGAGTTCCAGGTCG 8225
Query 105633 TCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGG 105692
| ||| | ||| | | ||||| || || ||||| |||||| | | ||||||
Sbjct 8226 TGAACCCGTGGCTCCTCAAGGACCTGGTCGACATGGGTCTGTGGTCCGATGCCATGAAGA 8285
Query 105693 ATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTA 105752
| | ||| | | | || ||||| ||||| ||| | || || || || |
Sbjct 8286 ACCGCATCATTGCCGAGAACGGATCCATCCAAAACATTCCCAACATCCCTGCCGACATCA 8345
Query 105753 AGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAG 105812
|| | | ||| || |||||||| || | | | || || | |||||||| |
Sbjct 8346 AGGCGCTCTACAAGACCGTTTGGGAGATTTCGCAGCGTCAGGTTGTTCAGATGGCCGCCG 8405
Query 105813 ATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTCTTCATGGAAAGTCCAAC 105870
| || || ||||||||| | |||| ||| |||| || |||| || || ||
Sbjct 8406 ACCGCGGCGCCTTCATTGACC--AGTCGCAGTCGCTGAACATCCACATGAAAGACCCCAC 8463
Query 105871 GATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGAT 105930
|||| ||| || | || |||||| | | | |||||| ||||||||| ||||| ||
Sbjct 8464 GATGGGCAAAATCACCTCGATGCACTTTGCCGGCTGGAAGCTGGGTCTCAAGACGGGCAT 8523
Query 105931 GTATTAC 105937
||| |||
Sbjct 8524 GTACTAC 8530
>seq1259
Length=27818
Score = 84.2 bits (92), Expect = 3e-11
Identities = 179/262 (68%), Gaps = 8/262 (3%)
Strand=Plus/Plus
Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762
||| || || || || ||||||| |||||| || ||||| ||| | | | || ||
Sbjct 2117 GGCGTCGATTTCGTCGATGAAGATGATGCAAGGGGCATTTTTGCGGCCTTCGGCGAACAG 2176
Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9821
||| || || | | | ||| || ||||||||||| ||||| || | || || ||
Sbjct 2177 ATCGCGGACCCTCGAAGGGCCGACGCCAACAAACATTTCCACGAACTCTGAACCGCTCAC 2236
Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881
|| | ||| || || || ||||| ||| |||| ||| | || |||||||| |
Sbjct 2237 GCTGAA-GAACGGAACGCCGGACTCACCAGCAGTGGCCTTGGCAATGAGCGTCTTACCAG 2295
Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC-ACTT--CCAAAGT 9938
|||| || ||||| |||| ||||| || || ||||||||||| | || |||| |
Sbjct 2296 TACCCGGAGGGCCCGCAAGGATCGCACCGCGCGGGATCTTGGCGCCGAGTTTCTCAAACT 2355
Query 9939 ATCTCTCAGGTTGCTTAAGAAA 9960
|||| || ||||| |||||
Sbjct 2356 ---TCTCGGGCTGCTTGAGAAA 2374
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583245970594160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |