Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1793 581 4e-161 >seq1793 Length=11804 Score = 581 bits (644), Expect = 4e-161 Identities = 1175/1727 (68%), Gaps = 45/1727 (3%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || ||||| |||||||||||||||||||||||| |||||| ||| | |||||| Sbjct 8538 GTGCGCAAGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGCATCGAG 8479 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | | ||| ||| | |||| | |||| |||||| |||||||| |||||||| ||| Sbjct 8478 GTGATTTTGCCCATCGTGGGGTCTTTCATGTGGATGTTCAGCGACTGCGACTGGTCAATG 8419 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACC-GACTTTTGCGGAATCTCCCAGATGGT 78368 | || ||||||||||| ||||| | | ||| ||| | ||| ||||||||| | ||| Sbjct 8418 AAGGCGCCGCGGTCGGCGGCCATCTGAACAACCTGACGCT-GCGAAATCTCCCAAACGGT 8360 Query 78369 CCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTACGCTCCCACCGG-CTC 78427 | ||| | ||||| | || | |||||| | | | | | ||| ||| Sbjct 8359 CTTGTAGAGCGCCTTGATGTCGGCAGGGATGTTGGGAATGTTTTGGATGGATCCGTTCTC 8300 Query 78428 GCACAAT--TTCA-TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGGA 78484 | |||| | | ||||| || | | ||| || || | || ||| || Sbjct 8299 GG-CAATGATGCGGTTCTTCATGGCATCGGACCACAGACCCATGTCGACCAGGTCCTTGA 8241 Query 78485 CCAGGTGCCGGTTAATCATGAC---GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGT 78541 || | |||| || ||| |||||| || |||| | |||||| ||||||||| Sbjct 8240 GGAGCCACGGGTT---CACGACCTGGAACTCCCCAGCCAAGACACGGCGCTGGTAGATGT 8184 Query 78542 TGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCG 78601 ||| |||||| ||||||||| ||| ||||| || | |||||| | ||||||||| || | Sbjct 8183 TGGACGTGTATGGCTCGAAACACTCATTGTTGCCGAGGATCTGAGAGGTCGAGGCCGTGG 8124 Query 78602 GCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGGC 78661 ||||||| || | || | || || || | ||||||| |||||| | |||| || Sbjct 8123 GCATGGGAGCAAGCAACAAGGAGTTGCGGATACCATGCTCCTTGATTTGCTCCTTCAGAT 8064 Query 78662 CGTCCCAA------AATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCT 78715 |||||| | |||| | | || ||||||||| || || ||||||| Sbjct 8063 TGTCCCATTCCCACAGTTCAGAAGGCTTGACGTTCCACATGTCAAACTGGAGAATACCCT 8004 Query 78716 CGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATG 78775 | || || || || || | || || |||| |||| ||||||||| || || |||| Sbjct 8003 CCGAGGCAGGTGATCCTTCAAAGGTGGAATAAGGACCCTGCTCCTTGGCAAGCTC-CATG 7945 Query 78776 -ACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 || | || || |||||||| || | |||||| || |||||| | ||| || ||| Sbjct 7944 GACGCAGTCAAGGAGGCGTGGTAGACGGTCTCGAAAATCTGCTTGTTCAACTCACGAGCC 7885 Query 78835 TTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCG 78894 | || || || | || | ||| | |||| | ||||| || ||||| || ||| Sbjct 7884 TCGGGTGACTCAAAGGGCAGACGGAGAGCGAGGAAGGCGTCGGCAAGACCCTGAACACCG 7825 Query 78895 ATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTC 78954 | | |||| |||| ||||||||||||||| || || ||| ||| |||||| ||| Sbjct 7824 ACACCGATGGGTCTGTGGCGCATGTTGCTGTTGCGAGCCTCCTGCACGGGGTAATGGTTG 7765 Query 78955 CGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCG 79014 ||||||| ||| ||||| || |||||| ||||||| || | || || Sbjct 7764 ACGTCGATGATCTTGTTTAGGTTGCGGACCACGACCTGAGTCACGTCATGCAGCTTCTGA 7705 Query 79015 AAATCAAAATGATTTCCTTTGATG-----AAAGTC-GGTAGGCACAGCGATGCCAGGTTG 79068 || ||| | || | ||| | |||| | || ||| ||||| || |||||| Sbjct 7704 AAGTCATATCGAGCCTCGTTGTAGTCAACAAAGGCAGGAAGGGCGAGCGAAGCAAGGTTG 7645 Query 79069 CACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGAC 79128 || |||||| |||||||||| || ||||| || || ||||| | |||||| || Sbjct 7644 CAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAGAGATTAGA--AC 7587 Query 79129 TT--GATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACA 79186 || |||||| || | |||||||||||||||||||| ||| || || ||||||||| || Sbjct 7586 TTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCA 7527 Query 79187 TGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCC 79246 || | || | ||||||||| |||| | | || | || ||||| | | |||| | Sbjct 7526 TGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGAGCTTCTGGGCGC 7467 Query 79247 GGACAACCTTCTTGTACCGACCCTGTGCGA-------CGTACGTCCGGTACAACTCGTTG 79299 ||| ||||| ||||||| ||| ||||| | ||||| | | Sbjct 7466 GGATGG---TCTTG---CGACCCT-TGCCCTCACGCTCGTACTTTTCGTACAGAGCCTCA 7414 Query 79300 AAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAG 79359 || |||| |||||| |||| ||||| |||||||| | || ||||| || |||| Sbjct 7413 AACTCCTCACCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACATGAGAGTCCAG 7354 Query 79360 TCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGG 79419 || ||| |||||| || || ||||||||| || |||||||||||||| ||| ||| Sbjct 7353 TCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGGCGAGGAAAAGG 7294 Query 79420 TCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATG 79479 || || || | |||||| | ||| |||||| ||| || ||||| || || | || Sbjct 7293 TCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAACTCAAAGACA 7234 Query 79480 TCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGG 79539 || |||||||| |||||||| |||||||| || | ||| |||||| ||| |||||| Sbjct 7233 TCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCACCTGGTCGCTTGTTGCCACCCTGG 7174 Query 79540 TTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACG 79599 | || || | ||||||||||||||| |||||||||||||| | || ||| | || Sbjct 7173 TCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGCCATTGGAAGTA 7114 Query 79600 CCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATG 79659 ||||| || || || || || | || || ||| | || || || ||| Sbjct 7113 CCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTGGACGTTGAGGCCAATG 7054 Query 79660 CCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATC 79719 || || | | |||||||| ||||| ||||||||| || |||||||||||||| Sbjct 7053 CCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCGATG 6994 Query 79720 GAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCG 79779 ||| |||||||| |||| ||||||||| |||| ||| | | | ||||| || Sbjct 6993 CTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTGGGCCTGGGGAGTACCAGCA 6934 Query 79780 TTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCC 79839 ||||| |||||||| | ||||| ||||||||||| | ||| || | |||||| || Sbjct 6933 TTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTTGTACGTTTCA 6874 Query 79840 TTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCAT 79886 |||||||| | || |||||| ||||||||| ||||| ||||| Sbjct 6873 ATGACGCGCTCAATGTTGTCGCCCCAGATGCCGACAGCGACACGCAT 6827 Score = 421 bits (466), Expect = 7e-113 Identities = 1147/1730 (66%), Gaps = 51/1730 (3%) Strand=Plus/Plus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177 ||||| ||||| ||||||||| |||||| || | ||| ||| || || ||| || Sbjct 6827 ATGCGTGTCGCTGTCGGCATCTGGGGCGACAACATTGAGCGCGTCATTGAAACGTACAAC 6886 Query 19178 CTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAA 19236 || ||| |||| ||||||||||| ||||| | |||||||||||||| || ||||| Sbjct 6887 CTCATGT-CCAGCAAGTTCTTCACCCACGCCTCTCCGACCCTTTTCAATGCTGGTACTCC 6945 Query 19237 CAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCAT 19296 | | | ||| |||| ||| ||||| || | ||||||||||||||||| |||||||| Sbjct 6946 CCAGGCCCAGCTGTCATCCTGCTTCCTCGTCGACATGAAGGATGACAGCATCGAGGGCAT 7005 Query 19297 CTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCA 19356 ||| || ||||||||| ||||| |||||||| | | || || || || || | Sbjct 7006 CTATGACACGCTCAAGACCTGCGCCATGATCTCCAAAATGGCTGGCGGCATTGGCCTCAA 7065 Query 19357 CTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGACGG 19416 | | ||||| | | ||| || || ||| || ||||| || | || Sbjct 7066 CGTCCACCGCATCCGTGCCACTGGCTCATACATTGCTGGCACCAACGGTACTTCCAATGG 7125 Query 19417 TATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGCGG 19476 || | || |||||||| || ||||||||||||||||| || || ||||||| ||| Sbjct 7126 CGTCATTCCCATGCTCCGAGTGTTCAACAACACGGCCAGATATGTAGACCAGGGTGGCAA 7185 Query 19477 CAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTT 19536 ||| || || | || ||||||||||| ||||| |||||||| || ||| | || || Sbjct 7186 CAAGCGACCAGGTGCCTTTGCCATCTACCTGGAGCCTTGGCACGCTGATGTCTTTGAGTT 7245 Query 19537 CCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGC 19596 |||||| || || |||||| || | |||||| | ||| || ||||| ||| || Sbjct 7246 CCTCGACCTACGTAAGAACCACGGCAAGGAGGAGGTTCGCGCGCGGGACCTTTTCCTCGC 7305 Query 19597 CTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGAT 19656 | ||||||| || || || |||||| || || |||||| ||| || ||| || || Sbjct 7306 CCTGTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGAACGGCGACTGGACTCTCAT 7365 Query 19657 GTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTA 19716 ||| || | || ||||| ||||| ||||| ||| || |||| ||| | | |||| Sbjct 7366 GTGTCCCAATGAGTGCCCCGGCCTTGCCGACTGCTATGGTGAGGAGTTTGAGGCTCTGTA 7425 Query 19717 CCGGACTTACGTAGC-CCAGGGC-CGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGG 19774 | | |||| ||| ||||| || || ||| |||| |||| | | ||||| Sbjct 7426 CGAAAAGTACG-AGCGTGAGGGCAAGGGTC-GCAAGACCATCCGCGCCCAGAAGCTCTGG 7483 Query 19775 GACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGCC 19834 || | | | || ||| |||||||||| || | |||| ||||||||| || Sbjct 7484 TACTCCATTTTGGAAGCTCAGACTGAGACCGGCAACCCCTTCATGCTCTACAAGGATGCT 7543 Query 19835 GCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC--AAGTCGTCCAACCTGTGTA 19892 ||| ||| || ||||||||| | || | ||| |||| || || || || | Sbjct 7544 TGCAACAAGAAGAGCAACCAGAAGAACCTAGGAACCATCAGAAGT--TCTAATCTCTGCA 7601 Query 19893 CTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGT 19952 | || || || || ||| ||||||||| ||||| || || || || || || Sbjct 7602 CGGAGATTATCGAATACTCCGCCCCGGACGAGGTGGCCGTCTGCAACCTTGCTTCGCTCG 7661 Query 19953 GCCTGCC-GACTTT-----CGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGG 20006 ||| || | |||| | ||| | | | |||||| || || | || | Sbjct 7662 CCCTTCCTGCCTTTGTTGACTACAACGAGGCTCGATATGACTTTCAGAAGCTGCATGACG 7721 Query 20007 TGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGACCG 20066 |||| | |||||| || || || || ||||||| ||| |||||| Sbjct 7722 TGACTCAGGTCGTGGTCCGCAACCTAAACAAGATCATCGACGTCAACCATTACCCCGTGC 7781 Query 20067 AGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGG 20126 ||| ||| ||||| || ||||||||| | || |||| |||| || ||||| || | Sbjct 7782 AGGAGGCTCGCAACAGCAACATGCGCCACAGACCCATCGGTGTCGGTGTTCAGGGTCTTG 7841 Query 20127 CCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACA 20186 |||||| ||| | ||| | || | || || ||| |||| || ||| | |||| Sbjct 7842 CCGACGCCTTCCTCGCTCTCCGTCTGCCCTTTGAGTCACCCGAGGCTCGTGAGTTGAACA 7901 Query 20187 AGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAAT-CGTGC---GAACTCGCC 20242 || || |||||| |||| ||||||| |||||| || | ||| | || || ||| Sbjct 7902 AGCAGATTTTCGAGACCGTCTACCACG----CCTCCTTGACTGCGTCCATGGAGCTTGCC 7957 Query 20243 AAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCCAG 20302 || ||| | || || || || || | || || || || || |||||||| |||||| Sbjct 7958 AAGGAGCAGGGTCCTTATTCCACCTTTGAAGGATCACCTGCCTCGGAGGGTATTCTCCAG 8017 Query 20303 CCGGACATGTGGGGCGTCA------CTGAGAATG-AGTTTTGGAGCGCCCTCAAGGTTGA 20355 ||||||||| ||||| |||| | || | ||| | || |||| | Sbjct 8018 TTTGACATGTGGAACGTCAAGCCTTCTGA-ACTGTGGGAATGGGACAATCTGAAGGAGCA 8076 Query 20356 GATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCGAC 20415 |||||| || || | |||||||| ||| | | || |||||||| || |||||||| Sbjct 8077 AATCAAGGAGCATGGTATCCGCAACTCCTTGTTGCTTGCTCCCATGCCCACGGCCTCGAC 8136 Query 20416 CGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTGCG 20475 | | |||||| | || ||||| ||| ||||||||| |||||| ||||||||||| ||| Sbjct 8137 CTCTCAGATCCTCGGCAACAATGAGTGTTTCGAGCCATACACGTCCAACATCTACCAGCG 8196 Query 20476 TCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGTCCGCGACTTGCAGAA 20535 ||| |||| || |||||| | || ||| | || || ||| || | Sbjct 8197 CCGTGTCTTGGCTGGGGAGTTCCAGGTCGTGAACCCGTGGCTCCTCAAGGACCTGGTCGA 8256 Query 20536 GATCGATATGTGGTC----GCCCAAAATTAAGAA-TGAA--ATTGTCCGAGCCGGCGGGA 20588 || | | ||||||| ||| || ||||| | | |||| ||||| ||| Sbjct 8257 CATGGGTCTGTGGTCCGATGCC----ATGAAGAACCGCATCATTG-CCGAG--AACGGAT 8309 Query 20589 GCGTCC-AGGCATT--GGATATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGG 20645 | ||| | |||| | ||||| || |||||| | |||| |||||| |||| Sbjct 8310 CCATCCAAAACATTCCCAACATCCCTGCCGACATCAAGGCGCTCTACAAGACCGTTTGGG 8369 Query 20646 AAATCCCACAG-AAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAG 20704 | || | ||| || | || | ||||| ||||| |||||||||| ||| |||||| Sbjct 8370 AGATTTCGCAGCGTCAGGTTGTTC-AGATGGCCGCCGACCGCGGCGCCTTCATTGACCAG 8428 Query 20705 TCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCAT 20764 || |||||||| || || |||| | | || | ||| || | | ||| ||||| Sbjct 8429 TCGCAGTCGCTGAACATCCACATGAAAGACCCCACGATGGGCAAAATCACCTCGATGCAC 8488 Query 20765 ATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCGGAC 20814 | ||||||| | ||| |||||||||||||||||||| |||| || Sbjct 8489 TTTGCCGGCTGGAAGCTGGGTCTCAAGACGGGCATGTACTACTTGCGCAC 8538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548510853756960