Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 237 2e-57
seq1207 143 3e-29
seq1923 93.3 5e-14
>seq1793
Length=11804
Score = 237 bits (262), Expect = 2e-57
Identities = 412/592 (70%), Gaps = 8/592 (1%)
Strand=Plus/Plus
Query 53195 ATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACGAC 53254
||||| ||||| | || ||| || ||| || ||| ||| ||| |||||| ||
Sbjct 6827 ATGCGTGTCGCTGTCGGCATCTGGGGCGACAACATTGAGCGCGTCATTGAAACGTACAAC 6886
Query 53255 TTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAAT 53314
| ||| | |||| ||| || |||||| | || ||||| ||||| ||||||||
Sbjct 6887 CTCATGTCCAGCAAGTTCTTCACCCACGCCTCTCCGACCCTTTTCAATGCTGGTACTCCC 6946
Query 53315 CACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATC 53374
|| | ||| |||| ||||||||| || | |||||||||||| ||||| ||||||
Sbjct 6947 CAGGCCCAGCTGTCATCCTGCTTCCTCGTCGACATGAAGGATGACAGCATCGAGGGCATC 7006
Query 53375 TACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC 53434
|| || ||||||||| || ||| |||||||| | | || || || || || ||
Sbjct 7007 TATGACACGCTCAAGACCTGCGCCATGATCTCCAAAATGGCTGGCGGCATTGGCCTCAAC 7066
Query 53435 TGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATG 53492
|| | || ||||||| | ||| || || || || ||||| || |||
Sbjct 7067 G--TCCACCGCATCCGTGCCACTGGCTCATACATTGCTGGCACCAACGGTACTTCCAATG 7124
Query 53493 GAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTG 53552
| || | || |||||||| || ||||||||||||||| | || || ||||||||||
Sbjct 7125 GCGTCATTCCCATGCTCCGAGTGTTCAACAACACGGCCAGATATGTAGACCAGGGTGGCA 7184
Query 53553 GGAAGCG-CAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611
||||| | ||| | | || ||||||||||| ||||| |||||||| || | | |||
Sbjct 7185 ACAAGCGACCAGGTG-CCTTTGCCATCTACCTGGAGCCTTGGCACGCTGATGTCTTTGAG 7243
Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACA 53671
|| ||||| || ||| ||| || || | || ||| | ||| || ||||| ||
Sbjct 7244 TTCCTCGACCTACGTAAGAACCACGGCAAGGAGGAGGTTCGCGCGCGGGACCTTTTCCTC 7303
Query 53672 GCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTG 53731
|| |||||||| || || ||||||||| | || |||||| ||| || ||| ||
Sbjct 7304 GCCCTGTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGAACGGCGACTGGACTCTC 7363
Query 53732 ATGTGCCCGAACGAGTGCCCCGGCC-TCCAGGGTGTCTACGGTGAGGAGTTT 53782
||||| || || ||||||||||||| | | | || ||| ||||||||||||
Sbjct 7364 ATGTGTCCCAATGAGTGCCCCGGCCTTGCCGACTG-CTATGGTGAGGAGTTT 7414
Score = 141 bits (156), Expect = 1e-28
Identities = 311/455 (68%), Gaps = 27/455 (6%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
||||||||| || | | || || ||||| || || ||||| |||||||| | ||||||
Sbjct 8096 CGCAACTCCTTGTTGCTTGCTCCCATGCCCACGGCCTCGACCTCTCAGATCCTCGGCAAC 8155
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|| ||| |||||||| |||||| |||||||||||| |||||| | | || || |||
Sbjct 8156 AATGAGTGTTTCGAGCCATACACGTCCAACATCTACCAGCGCCGTGTCTTGGCTGGGGAG 8215
Query 55604 TTT---GTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAAC 55660
|| ||| ||| || | ||| ||||||||||| | || ||||
Sbjct 8216 TTCCAGGTCGTGA---ACCCGTGGCTCCTCAAGGACCTGGTCGACATGGGTCTGTGGT-- 8270
Query 55661 CCGCAG--ATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAA---TCTGG 55712
||| | || |||| || || |||| |||||| ||| |||| || ||
Sbjct 8271 CCGATGCCATGAAGAACCGCATCATTGCCGAGAACGGA---TCCATCCAAAACATTCCCA 8327
Query 55713 AGATTCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGT 55771
| || ||| || | |||||| | | ||| ||| || ||||||||| | ||| ||
Sbjct 8328 ACATCCCTGC-CGACATCAAGGCGCTCTACAAGACCGTTTGGGAGATTTCGCAGC---GT 8383
Query 55772 CTGATTG---ACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAAC 55828
| | ||| | ||| || || || || || | ||| |||||||| ||||| ||||||
Sbjct 8384 CAGGTTGTTCAGATGGCCGCCGACCGCGGCGCCTTCATTGACCAGTCGCAGTCGCTGAAC 8443
Query 55829 ATCTTCATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAG 55888
||| |||| | | || | ||| ||| | | ||||||||||||| ||| ||||||
Sbjct 8444 ATCCACATGAAAGACCCCACGATGGGCAAAATCACCTCGATGCACTTTGCCGGCTGGAAG 8503
Query 55889 AAGGGACTCAAGACGGGTATGTACTATCTGCGGAC 55923
||| ||||||||||| |||||||| |||| ||
Sbjct 8504 CTGGGTCTCAAGACGGGCATGTACTACTTGCGCAC 8538
>seq1207
Length=30380
Score = 143 bits (158), Expect = 3e-29
Identities = 228/327 (70%), Gaps = 0/327 (0%)
Strand=Plus/Minus
Query 117274 GAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCATC 117333
|||||| ||||||| | ||||| | || || || ||||||||| || || |||||
Sbjct 28386 GAATATCTTCTTGGCAAATGGTGCCAACCGGGTAAAGGTGTAACGAGGACTGGCGGCATC 28327
Query 117334 CTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTGTT 117393
||||||||||||||| | ||| || | || || |||||||||| ||| | ||||||
Sbjct 28326 GGAGCCACCAGCAAGACGAGAACCAAAGTTCCCGCTAGGCTCCAAGATGTTGATGTTGTT 28267
Query 117394 GGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACCATG 117453
| || ||||| || || |||| | | ||| || || || ||| || || ||
Sbjct 28266 TGATCCAACAAAATTCTGCGCCAGGCCAATAATGGTCTGCTGCAGCGACGCTTCGCCGTG 28207
Query 117454 GTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGACGT 117513
||| || || |||||||| | ||||| ||||| |||| | ||||| |||| ||
Sbjct 28206 GTGGTATGCAGTCTGCTCAGAGACGTAACCCGCAAGCTCCACGACCTTTTTGTCCTTGGT 28147
Query 117514 CAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATCCGC 117573
||||||| |||| || || || | ||| || ||||| | ||||||| |||||
Sbjct 28146 CAGGTTCCGTTTGAAACAAGCGTACAGCACTTTCCGCTGCCCGGGCTTCAACCCATCAAT 28087
Query 117574 CACGTGAGGGATCGAACGCTTGATGTC 117600
||| || || |||||| || ||||
Sbjct 28086 GACGGATGGTATTGAACGCATGTTGTC 28060
Score = 87.8 bits (96), Expect = 2e-12
Identities = 233/346 (67%), Gaps = 10/346 (3%)
Strand=Plus/Minus
Query 152769 GTTGAGGACCAAGCCCTTGATGTGCGATCCGTCAAGATCCGCGTCGGTCATGATCATCAG 152828
||||| || | ||||||||||| || || | ||| || | ||||||||| ||
Sbjct 27609 GTTGATGAGAAGCCCCTTGATGTGACTGCCATCGTGGTCCTGATCTGCCATGATCATGAG 27550
Query 152829 ACGACCGTAGCGCAGGTCACGTAGTGAC-CCGTAGACCTTTCCATGT--TGAAGCCCGAG 152885
| | || ||||| ||| | | | ||| | |||||| || | ||| | || |||||
Sbjct 27549 ATGGCCATAGCGGAGG-CTCTTTGTGTCGGTGTAGAC--TTGCTTGTGCTTGAGACCGAG 27493
Query 152886 GATCTTTTTGAGGTTGGAAAATTCCTCATTATCGGTCACCTGTTTCACCGTGGCATCCCG 152945
|| || ||||| ||| | ||||| || | ||| | || | | | ||| || ||
Sbjct 27492 GAACTGTTTGATGTTTTGGATTTCCTGGTTCTTGGTGATTTGGTCGATGGAGGCGTCGCG 27433
Query 152946 AACATTGCGCGGCTTTCCCCGGAGTGGAAACACGCCGAACGCGTTGCGG-CCTACAA-CG 153003
|| ||| || | || || |||||||| || |||||| | || | ||| | | || ||
Sbjct 27432 CACGTTGAGCAGTTTACCTCGGAGTGGGAAGACGCCG-ATTCGATCCGGATCGAGAATCG 27374
Query 153004 CTCAGACCGGCAATAGCAAGGGCTTTCGCCGAGTCACCCTCGGTGATAATAAGCGTACAG 153063
| | | |||| | ||| ||| | || || ||||| || ||||| | ||| || || ||
Sbjct 27373 C-CCGGCCGGATACAGCCAGGCCCTTGGCGGAGTCTCCTTCGGTCAGAATGAGGGTGCAC 27315
Query 153064 TCGTGAGACCGATGAGTACCGGCCCAGTTGGCGTCGTCAAGCTTGG 153109
||||| || | || |||||| ||||||| ||| | |||||||
Sbjct 27314 TCGTGGCCGCGCTTCGTTCCGGCCAAGTTGGCCTCGACGAGCTTGG 27269
>seq1923
Length=107003
Score = 93.3 bits (102), Expect = 5e-14
Identities = 301/456 (66%), Gaps = 20/456 (4%)
Strand=Plus/Plus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| || ||||| ||||| ||||| ||||||||||| || ||| |||||||| |||||
Sbjct 7470 TACTCGCCGACTCGCTTCTCAAAGAAGTTGGTCTTGCCACCCAGTGAGATGTTTTCCATG 7529
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTC----CCCAAACTGTGCCATGAG 74578
| || || ||||| | ||| | |||||| || | | | ||| |||
Sbjct 7530 AAATCAAAGGGGTTGGCCGTCTTGTACAC---CTTCTCGTTGCCGAGAGCGA-CCAGGAG 7585
Query 74579 GCGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTT 74638
||| || || || |||| |||||||||| |||| || | |||||||| ||
Sbjct 7586 GCGGTCAGCGACGAATTCAATGTACTGCTTCATCAGAGTAGCGTTCATGCCGAGTAGAGC 7645
Query 74639 GCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTGGACA--ATC 74696
||||||| |||||||| | ||||| ||| | | | | | | || | ||
Sbjct 7646 ACACGGCAAAGCCTCGGTCAGGAACTCCTGCTCGA--TGGTGACGGCGTCGGTGATGATG 7703
Query 74697 TTGTGAATG-TCT--TTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGC 74752
| | ||| ||| ||| ||||| | | ||||||| |||| ||| | || |||
Sbjct 7704 TCTTTGATGATCTGCTTGCT--GGCACGGTGCT-TCAGGTGCGAGTGCAGCAGGCA-GGC 7759
Query 74753 AAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGG 74812
||| || ||| || || || | || | ||| || || || | ||||| ||
Sbjct 7760 AAAGTCGGTGTGCAGACCCTCGTCGCGCGAGATGAGTTCGTTAGAGAAGGTCAGGCCGGG 7819
Query 74813 CATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCC 74872
||| | || |||||||||| ||||||||||| |||| || ||||||||||||||
Sbjct 7820 CATCAAGCCCCGCTTCTTCAGCCAAAAGATGGAGGCAAAGGCGCCGCTGAAGAAGATGCC 7879
Query 74873 TTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAA 74908
|| ||| ||||||||||| | || || |||||
Sbjct 7880 CTCAACAGCGGCAAAGGCGACTAATCGCTGGGCGAA 7915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547202087033200
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