Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 298 6e-76
seq1893 199 5e-46
seq1479 150 2e-31
seq1745 140 4e-28
seq1207 136 5e-27
>seq1793
Length=11804
Score = 298 bits (330), Expect = 6e-76
Identities = 1135/1753 (65%), Gaps = 55/1753 (3%)
Strand=Plus/Minus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| |||| |||| |||||||||||||||||||| ||| |||||||||| | ||||
Sbjct 8544 GCCTGCGTGCGCAAGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGC 8485
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| || ||| || | | ||||||| | |||| ||||||||| ||||| |||||
Sbjct 8484 ATCGAGGTGATTTTGCCCATCGTGGGGTCTTTCATGTGGATGTTCAGCGACTGCGACTGG 8425
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAAT-TGACTTTTGTGGAATTTCCCA 80210
||||| || || || || || ||||| | || || |||| | | | ||| |||||
Sbjct 8424 TCAATGAAGGCGCCGCGGTCGGCGGCCATCTGAACAACCTGACGCT-GCGAAATCTCCCA 8366
Query 80211 TACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGA---TTTTGCACACT 80264
|| || || | |||| || | || | || |||| || ||||| | |
Sbjct 8365 AACGGTCTTGTAGAGCGCCTT--GATG-TCGGCAGGGATGTTGGGAATGTTTTGGA---T 8312
Query 80265 GCCACCGTCCTTTACAATTT---GATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTG 80321
| |||| || |||| | || |||| || | ||| | ||| | | |
Sbjct 8311 GGATCCGTTCTCGGCAATGATGCGGTTCTTCATGGCATCGGACCACAGACCCATGTCGAC 8252
Query 80322 CAGATCTTTCACAAGGTGCTTGTTAATCATGACA---AACTCTCCCGCGAGGGTGCGACG 80378
||| || || | || | ||| || ||| ||||| || || | | || ||
Sbjct 8251 CAGGTCCTTGAGGAGCCACGGGTT---CACGACCTGGAACTCCCCAGCCAAGACACGGCG 8195
Query 80379 CAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGT 80438
| | || | ||| | ||||| ||||| || ||| ||||| ||||||||||||| ||
Sbjct 8194 CTGGTAGATGTTGGACGTGTATGGCTCGAAACACTCATTGTTGCCGAGGATCTGAGAGGT 8135
Query 80439 GCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATC 80498
||||| ||||| || | | ||||| || || || | || |||| |||||| |
Sbjct 8134 CGAGGCCGTGGGCATGGGAGCAAGCAACAAGGAGTTGCGGATACCATGCTCCTTGATTTG 8075
Query 80499 CTCGCGCAAATCTGACCAAAAATCAAC---CCCAACGCTGTGACC--CCACATGTCGTGC 80553
||| || || || || | || | || ||| |||| ||||||||| |
Sbjct 8074 CTCCTTCAGAT-TGTCCCATTCCCACAGTTCAGAAGGCT-TGACGTTCCACATGTCAAAC 8017
Query 80554 TGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTG 80613
|| | || |||||||| || || || || | || || || || |||| | ||||
Sbjct 8016 TGGAGAATACCCTCCGAGGCAGGTGATCCTTCAAAGGTGGAATAAGGACCCTGCTCCTTG 7957
Query 80614 GCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTC 80673
|| ||||| ||| | | | || ||||| || | | ||| || | |||||||
Sbjct 7956 GCAAGCTCCATGGACGCAGTCAAGGAGGCGTGGTAGACGGTCTCGAAAATCTGCTTGTTC 7897
Query 80674 ACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGG 80733
| | || |||| || || || | || | | | ||| |||| || ||
Sbjct 7896 AACTCACGAGCCTCGGGTGACTCAAAGGGCAGACGGAGAGCGAGGAAGGCGTCGGCAAGA 7837
Query 80734 CCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAAT 80792
|||||||| |||| |||| || | ||||||| |||| | | || |||||| | |
Sbjct 7836 CCCTGAACACCGACACCGATGGGTCTGTGGCGCATGTT-GCTGTTGCGAGCCTCCTGCAC 7778
Query 80793 TGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATC 80852
|||||| ||| ||||||| ||| |||||||| || ||| | || || ||
Sbjct 7777 GGGGTAATGGTTGACGTCGATGATCTTGTTTAGGTTGCGGACCACGACCTGAGTCACGTC 7718
Query 80853 ATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTC------ACAAATGCCGGAAGGCTCAG 80906
||| || ||||||||||| || | | | || ||||| || |||||| ||
Sbjct 7717 ATGCAGCTTCTGAAAGTCATATCGAGCCTCGTTGTAGTCAACAAAGGCAGGAAGGGCGAG 7658
Query 80907 GGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCA 80966
|| || || ||||| ||||||||||| || | | | | |||| || ||||||||
Sbjct 7657 CGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCA 7598
Query 80967 CAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTC 81026
| ||||||| | || || || ||||| |||||||| ||| ||||||||| ||
Sbjct 7597 GAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 7538
Query 81027 CTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAAT 81086
||||||| |||| | ||| | |||||||| ||| | | | |||| || ||| |
Sbjct 7537 CTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGAG 7478
Query 81087 CTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTC 81146
|| | || || |||||| ||||| || | | ||||| |||| |
Sbjct 7477 CTTCTGGGCGCGGATGGTCTTGCGACCCTTGCCCTCACGCTCGTACTTTTCGTACAGAGC 7418
Query 81147 GTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGT 81205
|| |||| |||| | | || || | ||| | |||||||| || || ||||| ||
Sbjct 7417 CTCAAACTCCTCACCATAGCAG-TCGGCAAGGCCGGGGCACTCATTGGGACACATGAGAG 7359
Query 81206 GCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGA 81265
||||||| || ||||| ||| ||||||||| ||||||||||| |||||| ||
Sbjct 7358 TCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGGCGAGGA 7299
Query 81266 ACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCA 81325
| ||||| || ||| ||||||| | || ||||| || | ||||| || || |
Sbjct 7298 AAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAACTCAA 7239
Query 81326 TGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTG-CG---ACGGCCA 81381
|| || || ||||| |||||||| || | ||| | | | ||| | || ||||
Sbjct 7238 AGACATCAGCGTGCCAAGGCTCCAGGTAGATGGC-AAAGGCACCTGGTCGCTTGTTGCCA 7180
Query 81382 CCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCT 81441
||||||| || || | ||| || ||| || || || | ||| || |||| ||||
Sbjct 7179 CCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGCCATTG 7120
Query 81442 GACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAA 81499
|| |||||| || || | || || || |||| || | | || ||| |
Sbjct 7119 GAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTGGACGTTG--A 7062
Query 81500 GACCGATGCCACCTGACCACTTT-GAAATCTGAGCACACCGGTTCATGGTCTCATAAATT 81558
| || ||||| || | ||| ||| || ||| || || || | || ||||| ||
Sbjct 7061 GGCCAATGCCGCCAG-CCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATG 7003
Query 81559 CCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTT 81618
||||||||||| || | |||||||| | | ||| ||| ||||| || |||| |
Sbjct 7002 CCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCT--GGGCCTGGG 6945
Query 81619 GAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGT 81676
||| || |||||||| || || || | ||||| |||| | | | ||||| ||||
Sbjct 6944 GAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGT 6885
Query 81677 CATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAA 81736
|| ||||| ||||||| ||| | ||| || || |||| ||| ||||||||||
Sbjct 6884 TGTACGTTTCAATGACGCGCTCAATGTTGTCGCCCCAGATGCCGACAGCGACACGCATAA 6825
Query 81737 ACATGTACTGGGG 81749
||| | ||||||
Sbjct 6824 TCATATGCTGGGG 6812
>seq1893
Length=9943
Score = 199 bits (220), Expect = 5e-46
Identities = 182/230 (79%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462
|| ||||| || || || ||||| || ||||||||||| || || |||||||| ||||||
Sbjct 573 ATCATGCAGATTTTCGTGAAGACACTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCA 632
Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
|| | ||| | ||| | ||| | || ||||||||||||||||| || ||||| |||
Sbjct 633 TCCGACACCATCGACAATGTCAAGTCAAAGATTCAGGACAAGGAGGGCATCCCTCCGGAC 692
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||||| || ||||| ||||| ||||||||||| |||| ||||| || | |||||
Sbjct 693 CAGCAGCGACTGATTTTCGCTGGCAAGCAACTCGAAGATGGCCGTACTCTGTCCGACTAC 752
Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| |||| |||||||| || || ||||| ||| |||||||||| |||||
Sbjct 753 AACATCCAGAAGGAATCTACGCTGCATCTCGTCCTGCGTCTTCGGGGTGG 802
Score = 167 bits (184), Expect = 3e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
|||||||| || || |||||||| ||||| || ||||||||||| || | ||||
Sbjct 891 GTCAAGACCCTGACTGGCAAGACCATTACCCTCGAGGTTGAGTCCTCCGACACTATTGAC 950
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
|| | ||| | || |||||||| ||||| || || ||||| |||||||| ||||| |||
Sbjct 951 AACGTCAAGTCAAAGATTCAGGATAAGGAAGGGATCCCTCCGGACCAGCAACGTCTGATT 1010
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|| ||||| |||||||| || |||| || ||||| | ||||| || | |||||||||
Sbjct 1011 TTCGCTGGCAAGCAACTTGAAGATGGGCGCACCCTCTCCGACTACAACATTCAAAAGGAA 1070
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| || |||||| | || |||||||| || |||||
Sbjct 1071 TCAACACTTCATTTGGTGTTGCGTCTCCGAGGTGG 1105
Score = 145 bits (160), Expect = 9e-30
Identities = 173/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| |||||||| || | || |||||||| ||||| | ||||| || || ||
Sbjct 1107 ATGCAAATTTTTGTCAAAACCTTGACAGGCAAGACAATTACCTTGGAGGTGGAATCCAGT 1166
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || | ||| |||||||||| || ||||| || |||||||| || |||
Sbjct 1167 GATACTATTGACAACGTCAAGTCTAAAATTCAAGATAAGGAAGGTATTCCTCCGGATCAG 1226
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
|| ||||| ||||||||||| ||||| | || |||| ||| || || ||| || || ||
Sbjct 1227 CAACGTCTCATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACTCTGAGC-GATTACAA 1285
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636
|||| ||||| ||| || ||||| || | || || || || || |||
Sbjct 1286 CATCCAGAAGGAGAGCACCCTGCATCTCGTTCTTCGCCTGCGTGGAGGGCAA 1337
>seq1479
Length=130260
Score = 150 bits (166), Expect = 2e-31
Identities = 142/181 (78%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| || |||||||| || || || || || || || ||||| ||||| ||| | |||
Sbjct 49625 TTCGTGAAGACGCTGACGGGTAAAACCATCACCCTCGAGGTCGAGTCCTCTGACACCATC 49566
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| ||||||| |||||||||||||| |||||||| ||||||||||| |
Sbjct 49565 GACAATGTCAAGTCTAAAATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGATTG 49506
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
||||| || || |||||||||||||||| || ||||| | ||||| ||| ||||||||
Sbjct 49505 ATTTTCGCCGGCAAGCAACTCGAGGATGGCCGAACCCTGTCCGACTACAATATCCAAAAG 49446
Query 27595 G 27595
|
Sbjct 49445 G 49445
>seq1745
Length=53961
Score = 140 bits (154), Expect = 4e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| ||||| || || || || ||||| || || || ||||| |||||
Sbjct 17230 ATGCAGATCTTCGTCAAAACCCTGACGGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 17171
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||| | || |||||||||||||| ||||| || || || |||
Sbjct 17170 GACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 17111
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| || || |||||||| || || |||||||||| || ||||| ||| ||||| ||
Sbjct 17110 CAGCGACTCATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAA 17052
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
| || ||||| ||| || || | || |||| || ||||| |||
Sbjct 17051 CATTCAGAAGGAGAGCACCCTCCACTTGGTGCTGCGACTGCGCGGGGGA 17003
>seq1207
Length=30380
Score = 136 bits (150), Expect = 5e-27
Identities = 275/403 (68%), Gaps = 4/403 (1%)
Strand=Plus/Plus
Query 32002 CAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCG 32061
||||| || ||| | ||||| || |||| ||||||| | | |||| ||||| | |
Sbjct 28108 CAGCGGAAAGTGCTGTACGCTTGTTTCAAACGGAACCTGACCAAGGACAAAAAGGTCGTG 28167
Query 32062 CAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAG 32121
|||| |||| ||||| | ||||| || || || ||||||||||| |||||||| |||
Sbjct 28168 GAGCTTGCGGGTTACGTCTCTGAGCAGACTGCATACCACCACGGCGAAGCGTCGCTGCAG 28227
Query 32122 GGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAG 32181
|||||| | ||| || ||||| ||||| || |||| ||| | ||| | | |||
Sbjct 28228 CAGACCATTATTGGCCTGGCGCAGAATTTTGTTGGATCAAACAACATCAACATCTTGGAG 28287
Query 32182 CC-ATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTA 32240
|| | | ||| | ||||| | || || || |||||| ||||| || || | |||||
Sbjct 28288 CCTAGCGGGA-ACTTTGGTTCTCGTCTTGCTGGTGGCTCCGATGCCGCCAGTCCTCGTTA 28346
Query 32241 CATCTTCACCCGTCTCGCACC-TTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGG 32299
|| ||| ||||| | ||||| || | | | ||||| ||| ||| | |||||| |
Sbjct 28347 CACCTTTACCCGGTTGGCACCATTTGCCAAG-AAGATATTCTCCCCATTGGACGAGCCCA 28405
Query 32300 TGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGC 32359
|||| || | | || ||||| |||| |||| || | | | ||| || |
Sbjct 28406 GTCTCAGACACCAGTACGAAGACGGCAAGCGCATCGAACCAGAGGTGTACTCACCCATCA 28465
Query 32360 TTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402
| || ||||| | || ||||| || || ||||| || || ||
Sbjct 28466 TCCCCATGATTCTCGTCAACGGCGCCGACGGCATTGGGACCGG 28508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570295899858080
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