Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1793 298 6e-76 seq1893 199 5e-46 seq1479 150 2e-31 seq1745 140 4e-28 seq1207 136 5e-27 >seq1793 Length=11804 Score = 298 bits (330), Expect = 6e-76 Identities = 1135/1753 (65%), Gaps = 55/1753 (3%) Strand=Plus/Minus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| |||| |||| |||||||||||||||||||| ||| |||||||||| | |||| Sbjct 8544 GCCTGCGTGCGCAAGTAGTACATGCCCGTCTTGAGACCCAGCTTCCAGCCGGCAAAGTGC 8485 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 || || ||| || | | ||||||| | |||| ||||||||| ||||| ||||| Sbjct 8484 ATCGAGGTGATTTTGCCCATCGTGGGGTCTTTCATGTGGATGTTCAGCGACTGCGACTGG 8425 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTTCAATAAT-TGACTTTTGTGGAATTTCCCA 80210 ||||| || || || || || ||||| | || || |||| | | | ||| ||||| Sbjct 8424 TCAATGAAGGCGCCGCGGTCGGCGGCCATCTGAACAACCTGACGCT-GCGAAATCTCCCA 8366 Query 80211 TACTGTACGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGA---TTTTGCACACT 80264 || || || | |||| || | || | || |||| || ||||| | | Sbjct 8365 AACGGTCTTGTAGAGCGCCTT--GATG-TCGGCAGGGATGTTGGGAATGTTTTGGA---T 8312 Query 80265 GCCACCGTCCTTTACAATTT---GATTTTTCAATTCAGACGTCCAGACACCAAGCTTGTG 80321 | |||| || |||| | || |||| || | ||| | ||| | | | Sbjct 8311 GGATCCGTTCTCGGCAATGATGCGGTTCTTCATGGCATCGGACCACAGACCCATGTCGAC 8252 Query 80322 CAGATCTTTCACAAGGTGCTTGTTAATCATGACA---AACTCTCCCGCGAGGGTGCGACG 80378 ||| || || | || | ||| || ||| ||||| || || | | || || Sbjct 8251 CAGGTCCTTGAGGAGCCACGGGTT---CACGACCTGGAACTCCCCAGCCAAGACACGGCG 8195 Query 80379 CAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGT 80438 | | || | ||| | ||||| ||||| || ||| ||||| ||||||||||||| || Sbjct 8194 CTGGTAGATGTTGGACGTGTATGGCTCGAAACACTCATTGTTGCCGAGGATCTGAGAGGT 8135 Query 80439 GCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATC 80498 ||||| ||||| || | | ||||| || || || | || |||| |||||| | Sbjct 8134 CGAGGCCGTGGGCATGGGAGCAAGCAACAAGGAGTTGCGGATACCATGCTCCTTGATTTG 8075 Query 80499 CTCGCGCAAATCTGACCAAAAATCAAC---CCCAACGCTGTGACC--CCACATGTCGTGC 80553 ||| || || || || | || | || ||| |||| ||||||||| | Sbjct 8074 CTCCTTCAGAT-TGTCCCATTCCCACAGTTCAGAAGGCT-TGACGTTCCACATGTCAAAC 8017 Query 80554 TGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTG 80613 || | || |||||||| || || || || | || || || || |||| | |||| Sbjct 8016 TGGAGAATACCCTCCGAGGCAGGTGATCCTTCAAAGGTGGAATAAGGACCCTGCTCCTTG 7957 Query 80614 GCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTC 80673 || ||||| ||| | | | || ||||| || | | ||| || | ||||||| Sbjct 7956 GCAAGCTCCATGGACGCAGTCAAGGAGGCGTGGTAGACGGTCTCGAAAATCTGCTTGTTC 7897 Query 80674 ACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGG 80733 | | || |||| || || || | || | | | ||| |||| || || Sbjct 7896 AACTCACGAGCCTCGGGTGACTCAAAGGGCAGACGGAGAGCGAGGAAGGCGTCGGCAAGA 7837 Query 80734 CCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCG-GCCTCCGGAAT 80792 |||||||| |||| |||| || | ||||||| |||| | | || |||||| | | Sbjct 7836 CCCTGAACACCGACACCGATGGGTCTGTGGCGCATGTT-GCTGTTGCGAGCCTCCTGCAC 7778 Query 80793 TGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATC 80852 |||||| ||| ||||||| ||| |||||||| || ||| | || || || Sbjct 7777 GGGGTAATGGTTGACGTCGATGATCTTGTTTAGGTTGCGGACCACGACCTGAGTCACGTC 7718 Query 80853 ATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTC------ACAAATGCCGGAAGGCTCAG 80906 ||| || ||||||||||| || | | | || ||||| || |||||| || Sbjct 7717 ATGCAGCTTCTGAAAGTCATATCGAGCCTCGTTGTAGTCAACAAAGGCAGGAAGGGCGAG 7658 Query 80907 GGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCA 80966 || || || ||||| ||||||||||| || | | | | |||| || |||||||| Sbjct 7657 CGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCA 7598 Query 80967 CAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTC 81026 | ||||||| | || || || ||||| |||||||| ||| ||||||||| || Sbjct 7597 GAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 7538 Query 81027 CTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAAT 81086 ||||||| |||| | ||| | |||||||| ||| | | | |||| || ||| | Sbjct 7537 CTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGAG 7478 Query 81087 CTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTC 81146 || | || || |||||| ||||| || | | ||||| |||| | Sbjct 7477 CTTCTGGGCGCGGATGGTCTTGCGACCCTTGCCCTCACGCTCGTACTTTTCGTACAGAGC 7418 Query 81147 GTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGT 81205 || |||| |||| | | || || | ||| | |||||||| || || ||||| || Sbjct 7417 CTCAAACTCCTCACCATAGCAG-TCGGCAAGGCCGGGGCACTCATTGGGACACATGAGAG 7359 Query 81206 GCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGA 81265 ||||||| || ||||| ||| ||||||||| ||||||||||| |||||| || Sbjct 7358 TCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGGCGAGGA 7299 Query 81266 ACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCA 81325 | ||||| || ||| ||||||| | || ||||| || | ||||| || || | Sbjct 7298 AAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAACTCAA 7239 Query 81326 TGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTG-CG---ACGGCCA 81381 || || || ||||| |||||||| || | ||| | | | ||| | || |||| Sbjct 7238 AGACATCAGCGTGCCAAGGCTCCAGGTAGATGGC-AAAGGCACCTGGTCGCTTGTTGCCA 7180 Query 81382 CCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCT 81441 ||||||| || || | ||| || ||| || || || | ||| || |||| |||| Sbjct 7179 CCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGCCATTG 7120 Query 81442 GACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA--CCTTGCTGATTGAAA 81499 || |||||| || || | || || || |||| || | | || ||| | Sbjct 7119 GAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTGGACGTTG--A 7062 Query 81500 GACCGATGCCACCTGACCACTTT-GAAATCTGAGCACACCGGTTCATGGTCTCATAAATT 81558 | || ||||| || | ||| ||| || ||| || || || | || ||||| || Sbjct 7061 GGCCAATGCCGCCAG-CCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATG 7003 Query 81559 CCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTT 81618 ||||||||||| || | |||||||| | | ||| ||| ||||| || |||| | Sbjct 7002 CCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCT--GGGCCTGGG 6945 Query 81619 GAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGT 81676 ||| || |||||||| || || || | ||||| |||| | | | ||||| |||| Sbjct 6944 GAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGT 6885 Query 81677 CATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAA 81736 || ||||| ||||||| ||| | ||| || || |||| ||| |||||||||| Sbjct 6884 TGTACGTTTCAATGACGCGCTCAATGTTGTCGCCCCAGATGCCGACAGCGACACGCATAA 6825 Query 81737 ACATGTACTGGGG 81749 ||| | |||||| Sbjct 6824 TCATATGCTGGGG 6812 >seq1893 Length=9943 Score = 199 bits (220), Expect = 5e-46 Identities = 182/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| || || || ||||| || ||||||||||| || || |||||||| |||||| Sbjct 573 ATCATGCAGATTTTCGTGAAGACACTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCA 632 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || | ||| | ||| | ||| | || ||||||||||||||||| || ||||| ||| Sbjct 633 TCCGACACCATCGACAATGTCAAGTCAAAGATTCAGGACAAGGAGGGCATCCCTCCGGAC 692 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| || ||||| ||||| ||||||||||| |||| ||||| || | ||||| Sbjct 693 CAGCAGCGACTGATTTTCGCTGGCAAGCAACTCGAAGATGGCCGTACTCTGTCCGACTAC 752 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| |||||||| || || ||||| ||| |||||||||| ||||| Sbjct 753 AACATCCAGAAGGAATCTACGCTGCATCTCGTCCTGCGTCTTCGGGGTGG 802 Score = 167 bits (184), Expect = 3e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || || |||||||| ||||| || ||||||||||| || | |||| Sbjct 891 GTCAAGACCCTGACTGGCAAGACCATTACCCTCGAGGTTGAGTCCTCCGACACTATTGAC 950 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| | || |||||||| ||||| || || ||||| |||||||| ||||| ||| Sbjct 951 AACGTCAAGTCAAAGATTCAGGATAAGGAAGGGATCCCTCCGGACCAGCAACGTCTGATT 1010 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||| |||||||| || |||| || ||||| | ||||| || | ||||||||| Sbjct 1011 TTCGCTGGCAAGCAACTTGAAGATGGGCGCACCCTCTCCGACTACAACATTCAAAAGGAA 1070 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || |||||| | || |||||||| || ||||| Sbjct 1071 TCAACACTTCATTTGGTGTTGCGTCTCCGAGGTGG 1105 Score = 145 bits (160), Expect = 9e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| |||||||| || | || |||||||| ||||| | ||||| || || || Sbjct 1107 ATGCAAATTTTTGTCAAAACCTTGACAGGCAAGACAATTACCTTGGAGGTGGAATCCAGT 1166 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| || | ||| |||||||||| || ||||| || |||||||| || ||| Sbjct 1167 GATACTATTGACAACGTCAAGTCTAAAATTCAAGATAAGGAAGGTATTCCTCCGGATCAG 1226 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 || ||||| ||||||||||| ||||| | || |||| ||| || || ||| || || || Sbjct 1227 CAACGTCTCATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACTCTGAGC-GATTACAA 1285 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||| ||||| ||| || ||||| || | || || || || || ||| Sbjct 1286 CATCCAGAAGGAGAGCACCCTGCATCTCGTTCTTCGCCTGCGTGGAGGGCAA 1337 >seq1479 Length=130260 Score = 150 bits (166), Expect = 2e-31 Identities = 142/181 (78%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || || |||||||| || || || || || || || ||||| ||||| ||| | ||| Sbjct 49625 TTCGTGAAGACGCTGACGGGTAAAACCATCACCCTCGAGGTCGAGTCCTCTGACACCATC 49566 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| ||||||| |||||||||||||| |||||||| ||||||||||| | Sbjct 49565 GACAATGTCAAGTCTAAAATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGATTG 49506 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 ||||| || || |||||||||||||||| || ||||| | ||||| ||| |||||||| Sbjct 49505 ATTTTCGCCGGCAAGCAACTCGAGGATGGCCGAACCCTGTCCGACTACAATATCCAAAAG 49446 Query 27595 G 27595 | Sbjct 49445 G 49445 >seq1745 Length=53961 Score = 140 bits (154), Expect = 4e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || || || ||||| || || || ||||| ||||| Sbjct 17230 ATGCAGATCTTCGTCAAAACCCTGACGGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 17171 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||| | || |||||||||||||| ||||| || || || ||| Sbjct 17170 GACACCATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGAATCCCCCCGGATCAG 17111 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || |||||||| || || |||||||||| || ||||| ||| ||||| || Sbjct 17110 CAGCGACTCATCTTTGCTGGCAAACAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAA 17052 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || ||||| ||| || || | || |||| || ||||| ||| Sbjct 17051 CATTCAGAAGGAGAGCACCCTCCACTTGGTGCTGCGACTGCGCGGGGGA 17003 >seq1207 Length=30380 Score = 136 bits (150), Expect = 5e-27 Identities = 275/403 (68%), Gaps = 4/403 (1%) Strand=Plus/Plus Query 32002 CAGCGCAAGGTGATATACGCCTGCCTCAAGAAGAACCTGTCGAGTGACATGAAGGTGGCG 32061 ||||| || ||| | ||||| || |||| ||||||| | | |||| ||||| | | Sbjct 28108 CAGCGGAAAGTGCTGTACGCTTGTTTCAAACGGAACCTGACCAAGGACAAAAAGGTCGTG 28167 Query 32062 CAGCTGTCGGGCTACGTGGCAGAGCAAACGGCCTATCACCACGGCGAGGCGTCGCTCCAG 32121 |||| |||| ||||| | ||||| || || || ||||||||||| |||||||| ||| Sbjct 28168 GAGCTTGCGGGTTACGTCTCTGAGCAGACTGCATACCACCACGGCGAAGCGTCGCTGCAG 28227 Query 32122 GGCACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAG 32181 |||||| | ||| || ||||| ||||| || |||| ||| | ||| | | ||| Sbjct 28228 CAGACCATTATTGGCCTGGCGCAGAATTTTGTTGGATCAAACAACATCAACATCTTGGAG 28287 Query 32182 CC-ATCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTA 32240 || | | ||| | ||||| | || || || |||||| ||||| || || | ||||| Sbjct 28288 CCTAGCGGGA-ACTTTGGTTCTCGTCTTGCTGGTGGCTCCGATGCCGCCAGTCCTCGTTA 28346 Query 32241 CATCTTCACCCGTCTCGCACC-TTCGACGCGCAAGATTTTCGACCCGTCGGACGATGCGG 32299 || ||| ||||| | ||||| || | | | ||||| ||| ||| | |||||| | Sbjct 28347 CACCTTTACCCGGTTGGCACCATTTGCCAAG-AAGATATTCTCCCCATTGGACGAGCCCA 28405 Query 32300 TGCTCAAGTACAATTTTGATGACGGTCAGCGGGTCGAGCCGGTGTTCTACAGTCCGGTGC 32359 |||| || | | || ||||| |||| |||| || | | | ||| || | Sbjct 28406 GTCTCAGACACCAGTACGAAGACGGCAAGCGCATCGAACCAGAGGTGTACTCACCCATCA 28465 Query 32360 TTCCGATGATCTTGGTGAACGGTGCAGAAGGCATCGGAACGGG 32402 | || ||||| | || ||||| || || ||||| || || || Sbjct 28466 TCCCCATGATTCTCGTCAACGGCGCCGACGGCATTGGGACCGG 28508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570295899858080