Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq1154 120 2e-22
>seq1154
Length=35070
Score = 120 bits (132), Expect = 2e-22
Identities = 273/403 (68%), Gaps = 12/403 (3%)
Strand=Plus/Plus
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121
|||||||||||| | | |||| ||||| || | ||||||||| ||| ||| | |
Sbjct 3065 ACGTAAAACTGAGCAAAGACGTGACACGGCGGCAACGCCATGAGGTGCAAATCTCGCGCG 3124
Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCG 30181
||||| |||| || |||||| | || || | || ||||| |||| ||| | |
Sbjct 3125 TTCCACGCGCTCATGATGATTCTCCGATCGTACGGCTTGTTTCTGAGCTTGTCGATTACC 3184
Query 30182 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCT 30241
| |||||||| || ||| | || | ||| || | | | || |||||| ||
Sbjct 3185 TCGGCGAGCTGATCGACGCCCTTGCCAGTGTAATCCGTCTTTGCATCGACGTACTCGGCG 3244
Query 30242 CCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCG 30301
|| ||||| | ||| ||||| |||||||| ||||| || || || ||| | ||| |
Sbjct 3245 CCAAAATGGCGCCATTGGAAGCCGTACACGGGTCCAAGATCCCCAATTTCGCGCTGCGTG 3304
Query 30302 AAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CT 30359
| |||| ||||| | || || | ||| || ||| ||||||| ||||| || || |
Sbjct 3305 AGGCCCAAGTTGTCGAGGAACTCGCGGGATCCATTGCCGTCCCAAATCTTGACGCCGGCG 3364
Query 30360 T--CTCAGAG--AGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCC 30415
| ||||||| ||| ||| | ||| | |||||| | ||||||||||| || |
Sbjct 3365 TCGCTCAGAGCCAGC---GAGGA-TGTGTTG-CCCTCT-ATGAACCACAGCAATTCGGCG 3418
Query 30416 ACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30458
| |||||| | ||| || | ||| || |||| ||||||||
Sbjct 3419 ATGACGGCGCGCAGAAACACGCGCTTCGTGGTGATGAGGGGAA 3461
Score = 96.9 bits (106), Expect = 3e-15
Identities = 111/147 (76%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 29897 TAGACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTG 29955
|| ||||| ||||| |||| | ||| | ||| || || || | || || |||||
Sbjct 2828 TAAACGTGCGCGTCGCCCATGACGTGAGTCAAGCTG-CCAGGCACAAGATCGCACACGTG 2886
Query 29956 AGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCAT 30015
||| ||||||| ||||| || | |||||||| ||||| || || ||||||||||||||
Sbjct 2887 AGCAATCATGTGTGTGAGAAGCGCATAGCTGGCAATGTTGAACGGCACCCCGAGCCCCAT 2946
Query 30016 GTCCCCCGACCTCTGGTAGAGCTGACA 30042
||| | ||||||||||| ||||| ||
Sbjct 2947 GTCGCAAGACCTCTGGTACAGCTGGCA 2973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406300327819128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |