Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 100 2e-16
seq1745 98.7 6e-16
>seq1893
Length=9943
Score = 100 bits (110), Expect = 2e-16
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| |||| ||||||||||||||||| || || |||||||||||||| || || ||
Sbjct 1106 GCCACCTCGGAGACGCAACACCAAATGAAGTGTTGATTCCTTTTGAATGTTGTAGTCGGA 1047
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||||||||| || || || || || | ||| || |||||||| ||
Sbjct 1046 GAGGGTGCGCCCATCTTCAAGTTGCTTGCCAGCGAAAATCAGACGTTGCTGGTCCGGAGG 987
Query 34599 CACTCCCTCCTTGTC 34613
| || ||||| ||
Sbjct 986 GATCCCTTCCTTATC 972
Score = 87.8 bits (96), Expect = 1e-12
Identities = 163/237 (69%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || | |||||||| || | ||| || || ||||| || ||||| || || ||
Sbjct 803 GCCACCCCGAAGACGCAGGACGAGATGCAGCGTAGATTCCTTCTGGATGTTGTAGTCGGA 744
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| ||||| || || || || || | ||||| |||||||| ||
Sbjct 743 CAGAGTACGGCCATCTTCGAGTTGCTTGCCAGCGAAAATCAGTCGCTGCTGGTCCGGAGG 684
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| ||| |||| || || | || ||||| ||| |
Sbjct 683 GATGCCCTCCTTGTC-CTGAATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGA 625
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGATTG 34714
| || | ||| || || || ||||| | || ||||| |||||||||||| ||| ||
Sbjct 624 CCTCAAGGGTGATGGTCTTGCCGGTGAGTGTCTTCACGAAAATCTGCATGATGACTG 568
Score = 86.0 bits (94), Expect = 4e-12
Identities = 144/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562
||| || ||||||||||| || ||||| ||||| || || || | ||||| | ||
Sbjct 1310 ATGCAGGGTGCTCTCCTTCTGGATGTTGTAATCGCTCAGAGTGCGACCATCTTCCAACTG 1251
Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622
|| || ||||| || | ||| || || ||||| || | || ||||| ||| ||| ||
Sbjct 1250 CTTTCCAGCAAAAATGAGACGTTGCTGATCCGGAGGAATACCTTCCTTATCT-TGAATTT 1192
Query 34623 TTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681
| | || ||| | ||| || || | ||||| |||| ||| || || || || |
Sbjct 1191 TAGACTTGACGTTGTCAATAGTATCACTGGATTCCACCTCCAAGGTAATTGTCTTGCCTG 1132
Query 34682 TTAACGTTTTCACAAAAATCTGCATG 34707
| || ||||| |||||||| ||||||
Sbjct 1131 TCAAGGTTTTGACAAAAATTTGCATG 1106
>seq1745
Length=53961
Score = 98.7 bits (108), Expect = 6e-16
Identities = 157/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| |||| |||||| ||||| ||||||||||| |||||||| || || || || ||
Sbjct 17013 AGTCGCAGCACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGG 17072
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || ||||| || ||||| || | ||||| || ||||| || | ||| |||
Sbjct 17073 CCATCCTCGAGCTGTTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGGGATTCCTTCC 17132
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| ||| || | || || | ||| ||||| |||||| || | |||
Sbjct 17133 TTGTC-CTGAATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGT 17191
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||||| || || || | ||||| || || |||||||| |||
Sbjct 17192 GATCGTCTTCCCCGTCAGGGTTTTGACGAAGATCTGCATCTTG 17234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314721798049922
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |