Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 102 6e-17
>seq1893
Length=9943
Score = 102 bits (112), Expect = 6e-17
Identities = 168/239 (70%), Gaps = 5/239 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||| ||||| | || || || ||||| | || || ||| ||
Sbjct 1107 ATGCAAATTTTTGTCAAAACCTTGACAGGCAAGACAATTACCTTGGAGGTGGAATCCAGT 1166
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || |||| ||||| ||||| || || |||||| |||| ||| |
Sbjct 1167 GATACTATTGACAAC--GTCAAGTCTAAAATTCAAGATAAGGAAGGTATTCCTCCGGATC 1224
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
||||||| | |||||||| ||||| || ||||| || | |||| || ||||||||
Sbjct 1225 AGCAACGTCTCATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACTCTGAGCGATTACA 1284
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGG-CGGCGACGATTG 28025
||||||| || |||||||| ||||| | ||| | || ||||||| ||| | |||||
Sbjct 1285 ACATCCAGAAGGAGAGCACCCTGCATCTCGTTCTTCGCCTGCGTGGAGGGCAATGATTG 1343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355853578393518
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |