Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq1745 96.9 3e-15
>seq1745
Length=53961
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134
|||||| || || |||||||| || || || || || ||| || || || | || ||
Sbjct 17021 CACCAAGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTC 17080
Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194
||||||||||| ||||| || || |||||||| || | ||| | | || ||||||
Sbjct 17081 GAGCTGTTTGCCAGCAAAGATGAGTCGCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTG 17140
Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|| || |||| | | | || ||| |||||||| || | ||||| | ||
Sbjct 17141 AATCTTGGACTTGACATTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTT 17200
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
|||||||| ||||| || ||||| ||||||||
Sbjct 17201 CCCCGTCAGGGTTTTGACGAAGATCTGCATCTT 17233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429534951833042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |