Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq1893 95.1 8e-15 >seq1893 Length=9943 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || |||||| | || || || || || || | || || || |||| Sbjct 1107 ATGCAAATTTTTGTCAAAACCTTGACAGGCAAGACAATTACCTTGGAGGTGGAATCCAGT 1166 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||| | | || |||||| || || |||||| | || || ||||| Sbjct 1167 GATACTATTGACAACGTCAAGTCTAAAATTCAAGATAAGGAAGGTATTCCTCCGGATCAG 1226 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| || || || ||||||| | |||||| | ||||||||||| Sbjct 1227 CAACGTCTCATTTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACTCTGAGCGATTACAAC 1286 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || ||| ||| | ||| | ||| | | |||| ||||| Sbjct 1287 ATCCAGAAGGAGAGCACCCTGCATCTCGTTCTTCGCCTGCGTGGAGG 1333 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || ||||| || || || ||||| || || || || || | Sbjct 576 ATGCAGATTTTCGTGAAGACACTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCATCC 635 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | ||| ||| ||||| || || | || || || || Sbjct 636 GACACCATCGACAATGTCAAGTC-AAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCA 694 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || || ||||| ||||| ||||| | || ||| | ||| ||||| Sbjct 695 GCAGCGACTGATTTTCGCTGGCAAGCAACTCGAAGATGGCCGTACTCTGTCCGACTACAA 754 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || || || || Sbjct 755 CATCCAGAAGGAATCTAC 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338001220953272