Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1154 107 2e-18 >seq1154 Length=35070 Score = 107 bits (118), Expect = 2e-18 Identities = 126/168 (75%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 29648 AGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTCC 29706 |||| ||| ||||||| || ||||| || || |||| | ||| | ||| || || Sbjct 2807 AGCGCGTCCTCGTGGTCGGCATAAACGTGCGCGTCGCCCATGACGTGAGTCAAGCTG-CC 2865 Query 29707 CGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTT 29766 || | || || |||||||| ||||||| ||||| || | |||||||| ||||| Sbjct 2866 AGGCACAAGATCGCACACGTGAGCAATCATGTGTGTGAGAAGCGCATAGCTGGCAATGTT 2925 Query 29767 AAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 || |||||||||||||||||||| | ||||||||||| |||||||| Sbjct 2926 GAACGGCACCCCGAGCCCCATGTCGCAAGACCTCTGGTACAGCTGGCA 2973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406153131468124