Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1923 120 3e-22 >seq1923 Length=107003 Score = 120 bits (132), Expect = 3e-22 Identities = 332/497 (67%), Gaps = 14/497 (3%) Strand=Plus/Plus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 || ||||| ||| |||||||| || ||||| || || ||||| | | || || ||| Sbjct 7464 TTCTGGTACTCGCCGACTCGCTTCTCAAAGAAGTTGGTCTTGCCACCCAGTGAGATGTTT 7523 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376 ||||| |||||||| || || | | ||||| || || ||||| || || Sbjct 7524 TCCATGAAATCAAAGGGGTTGGCCGTCTTGTACACCTTCTCGTTGCCGAGAGCGACCAGG 7583 Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGT-TCGCAGTTAATTCCAATTA- 4434 | |||||||| || ||||| || ||||| |||| || | || ||| || || | || Sbjct 7584 AGGCGGTCAGCGACGAATTCAATGTACTGCTTCATCAGAGTAGC-GTTCATGCCGAGTAG 7642 Query 4435 ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494 | | ||| || | || | |||| ||||| || || || || ||||| || ||||| | Sbjct 7643 AGCACAC-GGCAAAGCCTCGGTCAGGAACTCCTGCTCGATGGTGACGGCGTCGGTGATGA 7701 Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAA-CAATAAACACGCA 4553 | ||||| || | | || | ||| | | || | | || | || ||| Sbjct 7702 TGTCTTTGATGATCTGCTT-GCTGGCACGGTGCTTCAGGTGCGAGTGCAGCAGGCAGGCA 7760 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGGG 4612 || || |||| ||| ||||| | || | || ||||||||||| || || | ||||| Sbjct 7761 AAGTCGGTGTGCAGACCCTCGTCGC-GCGAGATGAGTTCGTTAGAGAAGGTCAGGCCGGG 7819 Query 4613 CATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCC 4672 ||| || || | ||| || |||||||| || | |||||| | || ||||| ||||| Sbjct 7820 CATCAAGCCCCGCTTCTTCAGCCAAAAGATGGAGGCAAAGGCGCCGCTGAAGAAGATGCC 7879 Query 4673 TTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGG---CTTTGTCTTTAAT 4729 || || |||||||| || |||||||| ||| |||||| | ||||| | ||| Sbjct 7880 CTCAACAGCGGCAAAGGCGACTAATCGCTGGGCGA---AGCTGGATTCCTTGTCCTGAAT 7936 Query 4730 CCATTTTAATGCCCAGT 4746 ||| | | ||||||| Sbjct 7937 CCAGTGAATAGCCCAGT 7953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427039013707322