Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 183 4e-41
>seq1793
Length=11804
Score = 183 bits (202), Expect = 4e-41
Identities = 616/947 (65%), Gaps = 24/947 (3%)
Strand=Plus/Minus
Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACAT 77744
|| || || || || || || ||||| | | | || |||| || ||||| || ||
Sbjct 7656 GAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATAATCTCCGTGCAG 7597
Query 77745 AGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCC 77804
|||||| || | |||| || || || || | ||||||||||| || ||||| | |||
Sbjct 7596 AGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCC 7537
Query 77805 TTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACG 77864
|| || || || || || | ||||| ||| |||| | ||| | ||| || | ||||| |
Sbjct 7536 TTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATGGAGTACCAGA-G 7478
Query 77865 ACTCTAGCTTTTATCATAGATTTGTATCGCCT---CTCTCTTTCATA--TTGAGTATATA 77919
||| | || | ||| | | | ||| | || || || ||| | |
Sbjct 7477 CTTCTGGGCGCGG--ATGGTCTTGCGACCCTTGCCCTCACGCTCGTACTTTTCGTACAGA 7420
Query 77920 GCCGTTCAAATTCATCTCCCCAAA-CA-TCATCCAATCCAGGGCATTCATTTGGGCACAT 77977
||| ||||| || ||| ||| | || || | | || ||||| ||||| || |||||
Sbjct 7419 GCC--TCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGGACACAT 7364
Query 77978 CAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGC 78037
| | |||||| || | | || || || ||||| ||||||||||| ||||| || ||
Sbjct 7363 GAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCACAGGGC 7304
Query 78038 AATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAA 78097
| || || || || | | | || || || || ||||| || ||||| ||
Sbjct 7303 GAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTCGAGGAA 7244
Query 78098 CTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATT 78157
||| | | ||||| ||||| || || || || || || | | || ||||| || ||
Sbjct 7243 CTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCACCTGGTCGCTTGTT 7184
Query 78158 ACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 78217
|| ||||| |||| ||||||||| ||||| || | |||| | ||| ||||| | ||
Sbjct 7183 GCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAATGACGCC 7124
Query 78218 GTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGA 78277
|| || || || || || |||| ||| || ||| | || || || | |
Sbjct 7123 ATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTGGACGTT 7064
Query 78278 TATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGAT 78337
| || || || || ||||| || || || | ||||| || | || || |||||
Sbjct 7063 GAGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGAT 7004
Query 78338 ACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAAC 78397
||||| || ||||||||| |||||| | || || ||| |||| || ||
Sbjct 7003 GCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTGGGCCTGGGG 6944
Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457
||| || ||||| || | |||||||| || || || || | || || | || ||
Sbjct 6943 AGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTT 6884
Query 78458 GTATGTTTCAAT----AGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGC 78512
||| |||||||| ||| | | | |||| || |||| || || || ||||||
Sbjct 6883 GTACGTTTCAATGACGCGCTCAATGT-TGTCGCCCCAGATG----CCGACAGCGACACGC 6829
Query 78513 ATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTT 78572
|| | ||||||||| |||| || || |||| || | |||| | ||| |||
Sbjct 6828 ATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTACGATCGC 6769
Query 78573 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTA 78619
|||| ||| || || ||||| || | ||| |||||||| |||||
Sbjct 6768 TCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTCTCTGTCGTA 6722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694651138045760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |