Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1793 237 2e-57 seq1923 96.9 5e-15 >seq1793 Length=11804 Score = 237 bits (262), Expect = 2e-57 Identities = 746/1143 (65%), Gaps = 32/1143 (3%) Strand=Plus/Minus Query 76091 AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 76150 || || || || || |||||||| || | ||| || ||||| || | | | ||| | Sbjct 7851 AAGGCGTCGGCAAGACCCTGAACACCGACACCGATGGGTCTGTGGCGCATGTTGCTGTTG 7792 Query 76151 TCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACT 76210 ||| || | | ||||||| || | || || || || || || || | ||| || Sbjct 7791 CGAGCCTCCTGCACGGGGTAATGGTTGACGTCGATGATCTTGTTTAGGTTGCGGACCACG 7732 Query 76211 ACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC----TA-TCA-CAAAC 76264 || | | |||||| | || || |||| ||| || | || || ||| |||| Sbjct 7731 ACCTGAGTCACGTCATGCAGCTTCTGAAAGTCATATCGAGCCTCGTTGTAGTCAACAAAG 7672 Query 76265 ATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGT 76324 | ||| || | || || || || || ||||| ||||| | | || |||| Sbjct 7671 GCAGGAAGGGCGAGCGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCG 7612 Query 76325 ATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTT 76384 || ||||||||||| |||||| || |||| ||||| || || | ||||||||||| Sbjct 7611 ATAATCTCCGTGCAGAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTC 7552 Query 76385 TTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATA 76444 ||||| || | ||||| || || | || || | || || ||| |||| | ||| | | Sbjct 7551 TTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAA 7492 Query 76445 ATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTT---CTCTCTTTCA 76501 || || | ||||| | ||| | || | ||| | ||| ||| | || Sbjct 7491 ATGGAGTACCAGA-GCTTCTGGGCGCGG--ATGGTCTTGCGACCCTTGCCCTCACGCTCG 7435 Query 76502 TATTGT--GTATATAACCGTTCAAATTCATCTCCCCAAA-CA-TCATCCAAACCAGGACA 76557 || | | ||| | | || ||||| || ||| ||| | || || | | || || || Sbjct 7434 TACTTTTCGTACAGAGCC--TCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCA 7379 Query 76558 TTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATC 76617 ||||| |||||||| | | ||| || || | | || || || ||||| |||||||| Sbjct 7378 CTCATTGGGACACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATC 7319 Query 76618 AGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTT 76677 ||| ||||| || || | || || || || | | | || || || || ||||| Sbjct 7318 AGGGATCCACAGGGCGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTT 7259 Query 76678 TTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAAC 76737 || || |||||||| | | ||||| ||||| || || || || || || | | Sbjct 7258 ACGTAGGTCGAGGAACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGC 7199 Query 76738 ACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAA 76797 ||| ||||| || || || ||||| |||| ||||||||| ||||| || | |||| | Sbjct 7198 ACCTGGTCGCTTGTTGCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAG 7139 Query 76798 CATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACG 76857 ||| ||||| | ||| || || ||||| || || |||| ||| || ||| ||||| Sbjct 7138 CATGGGAATGACGCCATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACG 7079 Query 76858 AATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTT 76917 || | ||||| || || || |||||||| ||||| | || ||| || Sbjct 7078 GATGCGGTGGACGTTGAGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTT 7019 Query 76918 CAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGA 76977 | ||||||||||||||||| || || |||||| |||||| | || || ||| || Sbjct 7018 GAGCGTGTCATAGATGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGA 6959 Query 76978 CATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTT 77037 || || || ||| || ||||| || | || ||||| || || ||||| | || Sbjct 6958 CAGCTGGGCCTGGGGAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTT 6899 Query 77038 TTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT------CCCATTGATGAAT 77091 || | || ||||| |||||||| || || || | |||| |||| Sbjct 6898 GCTGGACATGAGGTTGTACGTTTCAATGACGCGCTCAATGTTGTCGCCCCA--GATG--- 6844 Query 77092 TCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTT 77151 || |||||||||||||| | ||||||||| ||||| || ||| |||| || | || Sbjct 6843 -CCGACAGCGACACGCATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGCTT 6785 Query 77152 CAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTC 77211 || | ||| ||| |||| ||| || || ||||| || | ||| |||||||| || Sbjct 6784 CAGGAGGTACGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTCTCTGTC 6725 Query 77212 GTA 77214 ||| Sbjct 6724 GTA 6722 >seq1923 Length=107003 Score = 96.9 bits (106), Expect = 5e-15 Identities = 176/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 || || || ||||| || || |||||||| ||||| || |||| ||||| | || | Sbjct 8131 TCAGAGTGGATGTTCTCCATCATGATCTGAAACCCGTAGAAGCATCGGGCTTCTGGAACC 8190 Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046 || ||||| | ||||| || || ||||| || || || || ||| || ||| Sbjct 8191 TGAACCTCGCCGCTGAATCGCTCTACCAGGTTCTCGTTGACGATGCCGTCAGAGGCGGCA 8250 Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTATTCCAG 47103 || || |||| | || || || ||||| || || | ||| | |||||||| Sbjct 8251 AAGAAAGCCAGGATGTGAGAGATGAAGTATTTCTCGTCATCATTCAATCGATTATTCCAA 8310 Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163 || | | ||| ||||| | ||| | ||||| ||||||||||| || ||||| ||||| Sbjct 8311 TCGTGCAGATCCTTTGAGAGATCAATCTCTTCGGCTGTCCAGAAGGAGGCCTCGGCTTTC 8370 Query 47164 TTATACATATTCCATAT 47180 || ||||| | ||| || Sbjct 8371 TTGTACATTTGCCAAAT 8387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712916273642880