Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 237 2e-57
seq1923 96.9 5e-15
>seq1793
Length=11804
Score = 237 bits (262), Expect = 2e-57
Identities = 746/1143 (65%), Gaps = 32/1143 (3%)
Strand=Plus/Minus
Query 76091 AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 76150
|| || || || || |||||||| || | ||| || ||||| || | | | ||| |
Sbjct 7851 AAGGCGTCGGCAAGACCCTGAACACCGACACCGATGGGTCTGTGGCGCATGTTGCTGTTG 7792
Query 76151 TCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACT 76210
||| || | | ||||||| || | || || || || || || || | ||| ||
Sbjct 7791 CGAGCCTCCTGCACGGGGTAATGGTTGACGTCGATGATCTTGTTTAGGTTGCGGACCACG 7732
Query 76211 ACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC----TA-TCA-CAAAC 76264
|| | | |||||| | || || |||| ||| || | || || ||| ||||
Sbjct 7731 ACCTGAGTCACGTCATGCAGCTTCTGAAAGTCATATCGAGCCTCGTTGTAGTCAACAAAG 7672
Query 76265 ATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGT 76324
| ||| || | || || || || || ||||| ||||| | | || ||||
Sbjct 7671 GCAGGAAGGGCGAGCGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCG 7612
Query 76325 ATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTT 76384
|| ||||||||||| |||||| || |||| ||||| || || | |||||||||||
Sbjct 7611 ATAATCTCCGTGCAGAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTC 7552
Query 76385 TTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATA 76444
||||| || | ||||| || || | || || | || || ||| |||| | ||| | |
Sbjct 7551 TTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAA 7492
Query 76445 ATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTT---CTCTCTTTCA 76501
|| || | ||||| | ||| | || | ||| | ||| ||| | ||
Sbjct 7491 ATGGAGTACCAGA-GCTTCTGGGCGCGG--ATGGTCTTGCGACCCTTGCCCTCACGCTCG 7435
Query 76502 TATTGT--GTATATAACCGTTCAAATTCATCTCCCCAAA-CA-TCATCCAAACCAGGACA 76557
|| | | ||| | | || ||||| || ||| ||| | || || | | || || ||
Sbjct 7434 TACTTTTCGTACAGAGCC--TCAAACTC--CTCACCATAGCAGTCGGCAAGGCCGGGGCA 7379
Query 76558 TTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATC 76617
||||| |||||||| | | ||| || || | | || || || ||||| ||||||||
Sbjct 7378 CTCATTGGGACACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATC 7319
Query 76618 AGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTT 76677
||| ||||| || || | || || || || | | | || || || || |||||
Sbjct 7318 AGGGATCCACAGGGCGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTT 7259
Query 76678 TTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAAC 76737
|| || |||||||| | | ||||| ||||| || || || || || || | |
Sbjct 7258 ACGTAGGTCGAGGAACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGC 7199
Query 76738 ACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAA 76797
||| ||||| || || || ||||| |||| ||||||||| ||||| || | |||| |
Sbjct 7198 ACCTGGTCGCTTGTTGCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAG 7139
Query 76798 CATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACG 76857
||| ||||| | ||| || || ||||| || || |||| ||| || ||| |||||
Sbjct 7138 CATGGGAATGACGCCATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACG 7079
Query 76858 AATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTT 76917
|| | ||||| || || || |||||||| ||||| | || ||| ||
Sbjct 7078 GATGCGGTGGACGTTGAGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTT 7019
Query 76918 CAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGA 76977
| ||||||||||||||||| || || |||||| |||||| | || || ||| ||
Sbjct 7018 GAGCGTGTCATAGATGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGA 6959
Query 76978 CATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTT 77037
|| || || ||| || ||||| || | || ||||| || || ||||| | ||
Sbjct 6958 CAGCTGGGCCTGGGGAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTT 6899
Query 77038 TTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATAT------CCCATTGATGAAT 77091
|| | || ||||| |||||||| || || || | |||| ||||
Sbjct 6898 GCTGGACATGAGGTTGTACGTTTCAATGACGCGCTCAATGTTGTCGCCCCA--GATG--- 6844
Query 77092 TCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTT 77151
|| |||||||||||||| | ||||||||| ||||| || ||| |||| || | ||
Sbjct 6843 -CCGACAGCGACACGCATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGCTT 6785
Query 77152 CAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTC 77211
|| | ||| ||| |||| ||| || || ||||| || | ||| |||||||| ||
Sbjct 6784 CAGGAGGTACGATCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTCTCTGTC 6725
Query 77212 GTA 77214
|||
Sbjct 6724 GTA 6722
>seq1923
Length=107003
Score = 96.9 bits (106), Expect = 5e-15
Identities = 176/257 (68%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986
|| || || ||||| || || |||||||| ||||| || |||| ||||| | || |
Sbjct 8131 TCAGAGTGGATGTTCTCCATCATGATCTGAAACCCGTAGAAGCATCGGGCTTCTGGAACC 8190
Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046
|| ||||| | ||||| || || ||||| || || || || ||| || |||
Sbjct 8191 TGAACCTCGCCGCTGAATCGCTCTACCAGGTTCTCGTTGACGATGCCGTCAGAGGCGGCA 8250
Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTATTCCAG 47103
|| || |||| | || || || ||||| || || | ||| | ||||||||
Sbjct 8251 AAGAAAGCCAGGATGTGAGAGATGAAGTATTTCTCGTCATCATTCAATCGATTATTCCAA 8310
Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163
|| | | ||| ||||| | ||| | ||||| ||||||||||| || ||||| |||||
Sbjct 8311 TCGTGCAGATCCTTTGAGAGATCAATCTCTTCGGCTGTCCAGAAGGAGGCCTCGGCTTTC 8370
Query 47164 TTATACATATTCCATAT 47180
|| ||||| | ||| ||
Sbjct 8371 TTGTACATTTGCCAAAT 8387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712916273642880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |