Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1893 140 7e-28
seq1745 100 7e-16
seq1479 89.7 1e-12
>seq1893
Length=9943
Score = 140 bits (154), Expect = 7e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| || ||||| || || ||||||||||| |||| | ||| | ||||||
Sbjct 787 AGGACGAGATGCAGCGTAGATTCCTTCTGGATGTTGTAGTCGGACAGAGTACGGCCATCT 728
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || ||||| || || | ||||||||||| | ||| || ||||| ||
Sbjct 727 TCGAGTTGCTTGCCAGCGAAAATCAGTCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 668
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
||||| ||| |||||| | || | | |||| || ||| || ||||| || || ||
Sbjct 667 TGAATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGACCTCAAGGGTGATGGTC 608
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||||||||| | ||||||
Sbjct 607 TTGCCGGTGAGTGTCTTCACGAAAATCTGCAT 576
>seq1745
Length=53961
Score = 100 bits (110), Expect = 7e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972
||| || || |||||||| ||| | || | ||||| || || ||| || || ||
Sbjct 17039 CTCCTTCTGAATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGTTTGCCAGCAAA 17098
Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032
||| || | |||||| |||| | |||||||||||| || ||||| || |||||| |
Sbjct 17099 GATGAGTCGCTGCTGATCCGGGGGGATTCCTTCCTTGTCCTGAATCTTGGACTTGACATT 17158
Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092
|| | | |||| ||| ||| || || || || || || || ||||| || || || ||
Sbjct 17159 GTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCCCCGTCAGGGTTTTGAC 17218
Query 152093 GAAGACCTGCATTTTACC 152110
||||| |||||| || ||
Sbjct 17219 GAAGATCTGCATCTTGCC 17236
>seq1479
Length=130260
Score = 89.7 bits (98), Expect = 1e-12
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976
|||||||| ||||| |||| | |||| ||||| || || || |||||||| ||
Sbjct 49447 TTTTGGATATTGTAGTCGGACAGGGTTCGGCCATCCTCGAGTTGCTTGCCGGCGAAAATC 49506
Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036
| | ||||||||| | | || || ||||| || || ||||| |||||| | ||
Sbjct 49507 AATCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGGATTTTAGACTTGACATTGTCG 49566
Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAA 152095
| | |||| || ||| || || || || || ||||| ||||| || |||||||||||
Sbjct 49567 ATGGTGTCAGAGGACTCGACCTCGAGGGTGATGGTTTTACCCGTCAGCGTCTTCACGAA 49625
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153790730708814
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |